CRYSTAL STRUCTURE OF A PUTATIVE REGULATORY PROTEIN INVOLVED IN TRANSCRIPTION (NGO1945) FROM NEISSERIA GONORRHOEAE FA 1090 AT 2.25 A RESOLUTION


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyNGO1945 N-terminal domain-like 8045666 4004603 SCOP2 (2022-06-29)
ASCOP2 FamilyPqqD-like 8091377 4005476 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyNGO1945 N-terminal domain-like 8091376 3002500 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyWinged helix DNA-binding domain 8091378 3000034 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ADUF2063e3deeA1 A: beta barrelsX: Pfam family PF09836 N-terminal domainH: Pfam family PF09836 N-terminal domainT: Pfam family PF09836 N-terminal domainF: DUF2063ECOD (v294.2)
ADHHA1e3deeA2 A: beta barrelsX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: DHHA1ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.150.690 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)
A3.90.930.50 Alpha Beta Alpha-Beta Complex Outer Surface Protein A domain 3CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF22106HvfC C-terminal domain (HvfC_C)HvfC C-terminal domainThis entry describes the N-terminal domain in HvfC ([swissprot:Q4QL34]), NGO_1945 ([swissprot:Q5F5I0], [pdbe:3dee]), BufC1 and various other proteins partnered with MNIO family peptide modification enzymes. HvfC, as described in Haemophilus influenza ...This entry describes the N-terminal domain in HvfC ([swissprot:Q4QL34]), NGO_1945 ([swissprot:Q5F5I0], [pdbe:3dee]), BufC1 and various other proteins partnered with MNIO family peptide modification enzymes. HvfC, as described in Haemophilus influenzae, is a partner protein to the multinuclear nonheme iron-dependent oxidase (MNIO) enzyme HvfB [swissprot:Q4QL34], and participates in post-translational modification that converts the precursor protein HvfA (Haemophilus virulence factor A) into a copper-binding metallophore and a contributor to the cell's ability to invade host cells and survive as an intracellular pathogen [1-3]. The related protein NGO_1945 occurs in a similar genomic context and was previously suggested to be a DNA-binding protein [4]. It comprises residues 31 to 117 as a helical bundle with 4 main helices [4]. The N-terminal is represented by [Pfam:PF09836].
Domain

InterPro: Protein Family Classification InterPro Database Homepage