Annotations: 2F4I

Crystal structure of an ob-fold protein (tm0957) from thermotoga maritima msb8 at 1.90 A resolution

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d2f4id_	All beta proteins	OB-fold	TM0957-like	TM0957-like	Hypothetical protein TM0957	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
C	d2f4ic_	All beta proteins	OB-fold	TM0957-like	TM0957-like	Hypothetical protein TM0957	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
B	d2f4ib_	All beta proteins	OB-fold	TM0957-like	TM0957-like	Hypothetical protein TM0957	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
A	d2f4ia1	All beta proteins	OB-fold	TM0957-like	TM0957-like	Hypothetical protein TM0957	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	TM0957-like	8040562	3000409	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	TM0957-like	8040562	3000409	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	TM0957-like	8040562	3000409	SCOP2B (2022-06-29)
A	SCOP2 Family	TM0957-like	8028183	4001804	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	TM0957-like	8040562	3000409	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Cpn10	e2f4iD1	A: a/b three-layered sandwiches	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Cpn10	ECOD (v294.1)
C	Cpn10	e2f4iC1	A: a/b three-layered sandwiches	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Cpn10	ECOD (v294.1)
B	Cpn10	e2f4iB1	A: a/b three-layered sandwiches	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Cpn10	ECOD (v294.1)
A	DUF2291	e2f4iA1	A: beta barrels	X: OB-fold	H: TM0957-like	T: TM0957-like	F: DUF2291	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	1.10.10.1260	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Envelope glycoprotein gp160, DUF2291, helical domain	CATH (4.3.0)
D	2.40.50.420	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Envelope glycoprotein gp160, DUF2291, alpha/beta domain	CATH (4.3.0)
C	1.10.10.1260	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Envelope glycoprotein gp160, DUF2291, helical domain	CATH (4.3.0)
C	2.40.50.420	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Envelope glycoprotein gp160, DUF2291, alpha/beta domain	CATH (4.3.0)
B	1.10.10.1260	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Envelope glycoprotein gp160, DUF2291, helical domain	CATH (4.3.0)
B	2.40.50.420	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Envelope glycoprotein gp160, DUF2291, alpha/beta domain	CATH (4.3.0)
A	1.10.10.1260	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Envelope glycoprotein gp160, DUF2291, helical domain	CATH (4.3.0)
A	2.40.50.420	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Envelope glycoprotein gp160, DUF2291, alpha/beta domain	CATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR036215	TM0957-like superfamily	Homologous Superfamily
A, B, C, D	IPR014582	Uncharacterised conserved protein UCP033535, periplasmic lipoprotein	Family

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A, B, C, D	MLY	Parent Component: LYS : AA0075 : N6,N6-dimethyl-L-lysine MOD:00084
A, B, C, D	MSE	Parent Component: MET : AA0075

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.