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 2F4I | pdb_00002f4i

Crystal structure of an ob-fold protein (tm0957) from thermotoga maritima msb8 at 1.90 A resolution

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Dd2f4id_ All beta proteins OB-fold TM0957-like TM0957-like Hypothetical protein TM0957 (Thermotoga maritima MSB8 ) [TaxId: 243274 ], SCOPe (2.08)
Cd2f4ic_ All beta proteins OB-fold TM0957-like TM0957-like Hypothetical protein TM0957 (Thermotoga maritima MSB8 ) [TaxId: 243274 ], SCOPe (2.08)
Bd2f4ib_ All beta proteins OB-fold TM0957-like TM0957-like Hypothetical protein TM0957 (Thermotoga maritima MSB8 ) [TaxId: 243274 ], SCOPe (2.08)
Ad2f4ia1 All beta proteins OB-fold TM0957-like TM0957-like Hypothetical protein TM0957 (Thermotoga maritima MSB8 ) [TaxId: 243274 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyTM0957-like 8040562 3000409 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyTM0957-like 8040562 3000409 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyTM0957-like 8040562 3000409 SCOP2B (2022-06-29)
ASCOP2 FamilyTM0957-like 8028183 4001804 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyTM0957-like 8040562 3000409 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DCpn10e2f4iD1 A: alpha arraysX: Phage tail fiber protein trimerization domainH: Phage tail fiber protein trimerization domainT: Phage tail fiber protein trimerization domainF: Cpn10ECOD (v295.2)
CCpn10e2f4iC1 A: alpha arraysX: Phage tail fiber protein trimerization domainH: Phage tail fiber protein trimerization domainT: Phage tail fiber protein trimerization domainF: Cpn10ECOD (v295.2)
BCpn10e2f4iB1 A: alpha arraysX: Phage tail fiber protein trimerization domainH: Phage tail fiber protein trimerization domainT: Phage tail fiber protein trimerization domainF: Cpn10ECOD (v295.2)
ADUF2291e2f4iA1 A: beta barrelsX: OB-foldH: TM0957-likeT: TM0957-likeF: DUF2291ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D1.10.10.1260 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Envelope glycoprotein gp160, DUF2291, helical domainCATH (4.3.0)
D2.40.50.420 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Envelope glycoprotein gp160, DUF2291, alpha/beta domainCATH (4.3.0)
C1.10.10.1260 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Envelope glycoprotein gp160, DUF2291, helical domainCATH (4.3.0)
C2.40.50.420 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Envelope glycoprotein gp160, DUF2291, alpha/beta domainCATH (4.3.0)
B1.10.10.1260 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Envelope glycoprotein gp160, DUF2291, helical domainCATH (4.3.0)
B2.40.50.420 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Envelope glycoprotein gp160, DUF2291, alpha/beta domainCATH (4.3.0)
A1.10.10.1260 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Envelope glycoprotein gp160, DUF2291, helical domainCATH (4.3.0)
A2.40.50.420 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Envelope glycoprotein gp160, DUF2291, alpha/beta domainCATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR036215TM0957-like superfamilyHomologous Superfamily
A, B, C, D
IPR014582Uncharacterised conserved protein UCP033535, periplasmic lipoproteinFamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B, C, D
MLY Parent Component: LYS

:  AA0075

:  N6,N6-dimethyl-L-lysine MOD:00084
A, B, C, D
MSE Parent Component: MET

:  AA0075