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 2VRS | pdb_00002vrs

Structure of avian reovirus sigmaC117-326, C2 crystal form

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyFibre shaft of virus attachment proteins 8092995 3001872 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyVirus attachment protein globular domain 8092993 3001376 SCOP2B (2022-06-29)
BSCOP2 FamilyReovirus sigma C capsid protein C-terminal domain-like 8046163 4004920 SCOP2 (2022-06-29)
BSCOP2 FamilyReovirus sigma C capsid protein shaft 8092994 4007788 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyVirus attachment protein globular domain 8092993 3001376 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyFibre shaft of virus attachment proteins 8092995 3001872 SCOP2 (2022-06-29)
ASCOP2B SuperfamilyVirus attachment protein globular domain 8092993 3001376 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyFibre shaft of virus attachment proteins 8092995 3001872 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CReo_sigmaC_Me2vrsC1 A: alpha arraysX: jelly-rollH: Triple beta-spiralT: Triple beta-spiralF: Reo_sigmaC_MECOD (v295.2)
Ce2vrsC2 A: alpha arraysX: Alpha helical domain of ribonucleotide reductasesH: Alpha helical domain of ribonucleotide reductasesT: Alpha helical domain of ribonucleotide reductasesF:ECOD (v295.2)
BReo_sigmaC_Me2vrsB1 A: alpha arraysX: jelly-rollH: Triple beta-spiralT: Triple beta-spiralF: Reo_sigmaC_MECOD (v295.2)
Be2vrsB2 A: alpha arraysX: Cytochrome P450H: Cytochrome P450T: Cytochrome P450F:ECOD (v295.2)
AReo_sigmaC_Me2vrsA1 A: alpha arraysX: jelly-rollH: Triple beta-spiralT: Triple beta-spiralF: Reo_sigmaC_MECOD (v295.2)
AReo_sigmaC_Me2vrsA2 A: alpha arraysX: jelly-rollH: Triple beta-spiralT: Triple beta-spiralF: Reo_sigmaC_MECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C1.20.5.170 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
C2.10.25.20 Mainly Beta Ribbon Laminin reovirus attachment protein sigma1CATH (4.3.0)
C2.60.90.40 Mainly Beta Sandwich Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) CATH (4.3.0)
B1.20.5.170 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
B2.10.25.20 Mainly Beta Ribbon Laminin reovirus attachment protein sigma1CATH (4.3.0)
B2.60.90.40 Mainly Beta Sandwich Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) CATH (4.3.0)
A1.20.5.170 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
A2.10.25.20 Mainly Beta Ribbon Laminin reovirus attachment protein sigma1CATH (4.3.0)
A2.60.90.40 Mainly Beta Sandwich Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
SIGMA-C CAPSID PROTEIN-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR041345Reovirus sigma C capsid protein triple beta spiralDomain
A, B, C
IPR007662Reovirus sigma C capsid protein, C-terminalDomain