Structure of the P pilus usher (PapC) translocation pore
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | zf-MYND | e2vqiA1 | A: a/b three-layered sandwiches | X: jelly-roll | H: Double-stranded beta-helix | T: Double-stranded beta-helix | F: zf-MYND | ECOD (v294.1) |
| B | Pyrid_oxidase_2 | e2vqiB1 | A: a/b three-layered sandwiches | X: PBZ domain | H: PBZ domain | T: PBZ domain | F: Pyrid_oxidase_2 | ECOD (v294.1) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| OUTER MEMBRANE USHER PROTEIN PAPC |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR042186 | Outer membrane usher protein FimD, plug domain | Homologous Superfamily | |
| IPR037224 | PapC, N-terminal domain superfamily | Homologous Superfamily | |
| IPR018030 | Fimbrial membrane usher, conserved site | Conserved Site | |
| IPR025885 | PapC, N-terminal domain | Domain | |
| IPR043142 | PapC-like, C-terminal domain superfamily | Homologous Superfamily | |
| IPR025949 | PapC-like, C-terminal domain | Domain | |
| IPR000015 | Outer membrane usher protein | Family |
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Beta-barrel transmembrane | Fimbrial usher porin (n=24,S=26) | Fimbrial usher porin |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | TRANSMEMBRANE PROTEINS: BETA-BARREL | Beta-Barrel Membrane Proteins: Monomeric/Dimeric | P pilus usher translocation domain, PapC130-640 |














