2VLA | pdb_00002vla

Crystal structure of restriction endonuclease BpuJI recognition domain in complex with cognate DNA

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyBpuJI recognition domain-like 8046659 4005221 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyWinged helix DNA-binding domain 8102969 3000034 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyWinged helix DNA-binding domain 8102968 3000034 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AADPRTs_Tse2e2vlaA1 A: beta barrelsX: ADP-ribosylationH: ADP-ribosylationT: ADP-ribosylationF: ADPRTs_Tse2ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.10.2080 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A CATH (4.3.0)
A1.10.1740.180 Mainly Alpha Orthogonal Bundle Rna Polymerase Sigma Factor Chain: ACATH (4.3.0)
A1.10.10.2090 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth M]5'-D(*TP*CP*CP*AP*CP*GP*GP*GP*TP*AP *CP*C)-3'---
B [auth L]5'-D(*GP*GP*TP*AP*CP*CP*CP*GP*TP*GP *GP*A)-3'---
RESTRICTION ENDONUCLEASE R.BPUJI - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR024975Protein NO VEIN, C-terminalDomain
IPR021108Restriction endonuclease, type II, BpuJI, N-terminalDomain