Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad2toda1 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase-like Alanine racemase C-terminal domain-like Eukaryotic ODC-like Eukaryotic ornithine decarboxylase (ODC) (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)
Ad2toda2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Eukaryotic ornithine decarboxylase (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)
Bd2todb1 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase-like Alanine racemase C-terminal domain-like Eukaryotic ODC-like Eukaryotic ornithine decarboxylase (ODC) (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)
Bd2todb2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Eukaryotic ornithine decarboxylase (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)
Cd2todc1 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase-like Alanine racemase C-terminal domain-like Eukaryotic ODC-like Eukaryotic ornithine decarboxylase (ODC) (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)
Cd2todc2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Eukaryotic ornithine decarboxylase (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)
Dd2todd1 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase-like Alanine racemase C-terminal domain-like Eukaryotic ODC-like Eukaryotic ornithine decarboxylase (ODC) (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)
Dd2todd2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Eukaryotic ornithine decarboxylase (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyEukaryotic ODC-like 8029952 4003520 SCOP2 (2022-06-29)
ASCOP2 FamilyAlanine racemase-like, N-terminal domain 8030904 4003111 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyAlanine racemase C-terminal domain-like 8042331 3001044 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyPLP-binding barrel 8043283 3000273 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyAlanine racemase C-terminal domain-like 8042331 3001044 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyPLP-binding barrel 8043283 3000273 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyAlanine racemase C-terminal domain-like 8042331 3001044 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyAlanine racemase C-terminal domain-like 8042331 3001044 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyPLP-binding barrel 8043283 3000273 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyAlanine racemase C-terminal domain-like 8042331 3001044 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyPLP-binding barrel 8043283 3000273 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyAlanine racemase C-terminal domain-like 8042331 3001044 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyAlanine racemase C-terminal domain-like 8042331 3001044 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AOrn_DAP_Arg_deC_Ce2todA4 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Orn_DAP_Arg_deC_CECOD (1.6)
AOrn_DAP_Arg_deC_Ne2todA3 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Orn_DAP_Arg_deC_NECOD (1.6)
BOrn_DAP_Arg_deC_Ce2todB4 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Orn_DAP_Arg_deC_CECOD (1.6)
BOrn_DAP_Arg_deC_Ne2todB3 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Orn_DAP_Arg_deC_NECOD (1.6)
COrn_DAP_Arg_deC_Ce2todC4 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Orn_DAP_Arg_deC_CECOD (1.6)
COrn_DAP_Arg_deC_Ne2todC3 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Orn_DAP_Arg_deC_NECOD (1.6)
DOrn_DAP_Arg_deC_Ce2todD4 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Orn_DAP_Arg_deC_CECOD (1.6)
DOrn_DAP_Arg_deC_Ne2todD3 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Orn_DAP_Arg_deC_NECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF02784Pyridoxal-dependent decarboxylase, pyridoxal binding domain (Orn_Arg_deC_N)Pyridoxal-dependent decarboxylase, pyridoxal binding domainThese pyridoxal-dependent decarboxylases acting on ornithine, lysine, arginine and related substrates This domain has a TIM barrel fold.Domain
A, B, C, D
PF00278Pyridoxal-dependent decarboxylase, C-terminal sheet domain (Orn_DAP_Arg_deC)Pyridoxal-dependent decarboxylase, C-terminal sheet domainThese pyridoxal-dependent decarboxylases act on ornithine, lysine, arginine and related substrates.Domain