2ESN
The crystal structure of probable transcriptional regulator PA0477 from Pseudomonas aeruginosa
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | LysR-like transcriptional regulators | 8002820 | 4000316 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Phosphate binding protein-like | 8002821 | 4000229 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Winged helix DNA-binding domain | 8017672 | 3000034 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Type 2 solute binding protein-like | 8002822 | 3000083 | SCOP2 (2022-06-29) |
B [auth C] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8017672 | 3000034 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | Type 2 solute binding protein-like | 8002822 | 3000083 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | Type 2 solute binding protein-like | 8002822 | 3000083 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8017672 | 3000034 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Winged helix DNA-binding domain | 8017672 | 3000034 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Type 2 solute binding protein-like | 8002822 | 3000083 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | HTH_1 | e2esnA1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: HTH_1 | ECOD (1.6) |
A | LysR_substrate_2 | e2esnA4 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: LysR_substrate_2 | ECOD (1.6) |
A | UNK_F_TYPE | e2esnA3 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: UNK_F_TYPE | ECOD (1.6) |
B [auth C] | HTH_1 | e2esnC1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: HTH_1 | ECOD (1.6) |
B [auth C] | LysR_substrate_2 | e2esnC3 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: LysR_substrate_2 | ECOD (1.6) |
B [auth C] | UNK_F_TYPE | e2esnC2 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: UNK_F_TYPE | ECOD (1.6) |
C [auth B] | HTH_1 | e2esnB1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: HTH_1 | ECOD (1.6) |
C [auth B] | LysR_substrate_2 | e2esnB2 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: LysR_substrate_2 | ECOD (1.6) |
C [auth B] | UNK_F_TYPE | e2esnB3 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: UNK_F_TYPE | ECOD (1.6) |
D | HTH_1 | e2esnD1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: HTH_1 | ECOD (1.6) |
D | LysR_substrate_2 | e2esnD3 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: LysR_substrate_2 | ECOD (1.6) |
D | UNK_F_TYPE | e2esnD2 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: UNK_F_TYPE | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B [auth C], C [auth B], D | PF03466 | LysR substrate binding domain (LysR_substrate) | LysR substrate binding domain | - | Family |
A, B [auth C], C [auth B], D | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family (HTH_1) | Bacterial regulatory helix-turn-helix protein, lysR family | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B [auth C], C [auth B], D | IPR005119 | LysR, substrate-binding | Domain |
A, B [auth C], C [auth B], D | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
A, B [auth C], C [auth B], D | IPR050389 | LysR-type Transcriptional Regulators | Family |
A, B [auth C], C [auth B], D | IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |
A, B [auth C], C [auth B], D | IPR000847 | Transcription regulator HTH, LysR | Domain |