1Y55
Crystal structure of the C122S mutant of E. Coli expressed avidin related protein 4 (AVR4)-biotin complex
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth X] | d1y55x1 | All beta proteins | Streptavidin-like | Avidin/streptavidin | Avidin/streptavidin | automated matches | chicken (Gallus gallus ) [TaxId: 9031 ], | SCOPe (2.08) |
A [auth X] | d1y55x2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | chicken (Gallus gallus ) [TaxId: 9031 ], | SCOPe (2.08) |
B [auth Y] | d1y55y1 | All beta proteins | Streptavidin-like | Avidin/streptavidin | Avidin/streptavidin | automated matches | chicken (Gallus gallus ) [TaxId: 9031 ], | SCOPe (2.08) |
B [auth Y] | d1y55y2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | chicken (Gallus gallus ) [TaxId: 9031 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth X] | SCOP2B Superfamily | Avidin/streptavidin | 8070804 | 3001465 | SCOP2B (2022-06-29) |
B [auth Y] | SCOP2B Superfamily | Avidin/streptavidin | 8070804 | 3001465 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth X] | Avidin | e1y55X1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Avidin/Streptavidin (From Topology) | T: Avidin/Streptavidin | F: Avidin | ECOD (1.6) |
B [auth Y] | Avidin | e1y55Y1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Avidin/Streptavidin (From Topology) | T: Avidin/Streptavidin | F: Avidin | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth X] | 2.40.128.30 | Mainly Beta | Beta Barrel | Lipocalin | Avidin-like | CATH (4.3.0) |
B [auth Y] | 2.40.128.30 | Mainly Beta | Beta Barrel | Lipocalin | Avidin-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth X], B [auth Y] | PF01382 | Avidin family (Avidin) | Avidin family | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth X], B [auth Y] | Avidin-related protein 4/5 | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth X], B [auth Y] | IPR017889 | Avidin-like, conserved site | Conserved Site |
A [auth X], B [auth Y] | IPR036896 | Avidin-like superfamily | Homologous Superfamily |
A [auth X], B [auth Y] | IPR051764 | Avidin/Streptavidin-related | Family |
A [auth X], B [auth Y] | IPR005468 | Avidin/streptavidin | Family |
A [auth X], B [auth Y] | IPR005469 | Avidin | Family |