1T98
Crystal Structure of MukF(1-287)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1t98a1 | All alpha proteins | DNA/RNA-binding 3-helical bundle | 'Winged helix' DNA-binding domain | MukF N-terminal domain-like | Chromosome partition protein MukF (KicB), N-terminal domain | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
A | d1t98a2 | All alpha proteins | STAT-like | MukF C-terminal domain-like | MukF C-terminal domain-like | Chromosome partition protein MukF (KicB), C-terminal domain | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
B | d1t98b1 | All alpha proteins | DNA/RNA-binding 3-helical bundle | 'Winged helix' DNA-binding domain | MukF N-terminal domain-like | Chromosome partition protein MukF (KicB), N-terminal domain | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
B | d1t98b2 | All alpha proteins | STAT-like | MukF C-terminal domain-like | MukF C-terminal domain-like | Chromosome partition protein MukF (KicB), C-terminal domain | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Winged helix DNA-binding domain | 8003374 | 3000034 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | MukF middle domain-like | 8056322 | 3002344 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | MukF middle domain-like | 8056322 | 3002344 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Winged helix DNA-binding domain | 8003374 | 3000034 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | KicB | e1t98A1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: KicB | ECOD (1.6) |
A | MukF_M | e1t98A2 | A: alpha bundles | X: STAT-like | H: MukF C-terminal domain-like (From Topology) | T: MukF C-terminal domain-like | F: MukF_M | ECOD (1.6) |
B | KicB | e1t98B1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: KicB | ECOD (1.6) |
B | MukF_M | e1t98B2 | A: alpha bundles | X: STAT-like | H: MukF C-terminal domain-like (From Topology) | T: MukF C-terminal domain-like | F: MukF_M | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
A | 1.20.58.590 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
B | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
B | 1.20.58.590 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF17192 | MukF middle domain (MukF_M) | MukF middle domain | The kicA and kicB genes are found upstream of mukB. It has been suggested that the kicB gene encodes a killing factor and the kicA gene codes for a protein that suppresses the killing function of the kicB gene product [1]. It was also demonstrated th ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR005582 | Chromosome partition protein MukF | Family | |
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR036141 | MukF, middle domain superfamily | Homologous Superfamily | |
IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily | |
IPR033439 | Chromosome partition protein MukF, winged-helix domain | Domain | |
IPR038198 | MukF, C-terminal domain superfamily | Homologous Superfamily | |
IPR033441 | Chromosome partition protein MukF, C-terminal domain | Domain | |
IPR033440 | Chromosome partition protein MukF, middle domain | Domain |