1SU1
Structural and biochemical characterization of Yfce, a phosphoesterase from E. coli
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d1su1b_ | Alpha and beta proteins (a+b) | Metallo-dependent phosphatases | Metallo-dependent phosphatases | YfcE-like | Phosphodiesterase yfcE | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
C | d1su1c_ | Alpha and beta proteins (a+b) | Metallo-dependent phosphatases | Metallo-dependent phosphatases | YfcE-like | Phosphodiesterase yfcE | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
D | d1su1d_ | Alpha and beta proteins (a+b) | Metallo-dependent phosphatases | Metallo-dependent phosphatases | YfcE-like | Phosphodiesterase yfcE | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
A | d1su1a_ | Alpha and beta proteins (a+b) | Metallo-dependent phosphatases | Metallo-dependent phosphatases | YfcE-like | Phosphodiesterase yfcE | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Metallo-dependent phosphatases | 8039696 | 3001067 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Metallo-dependent phosphatases | 8039696 | 3001067 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Metallo-dependent phosphatases | 8039696 | 3001067 | SCOP2B (2022-06-29) |
A | SCOP2 Family | YfcE-like | 8027317 | 4002849 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Metallo-dependent phosphatases | 8039696 | 3001067 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | Metallophos_2 | e1su1B1 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: Metallo-dependent phosphatases (From Topology) | T: Metallo-dependent phosphatases | F: Metallophos_2 | ECOD (1.6) |
C | Metallophos_2 | e1su1C1 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: Metallo-dependent phosphatases (From Topology) | T: Metallo-dependent phosphatases | F: Metallophos_2 | ECOD (1.6) |
D | Metallophos_2 | e1su1D1 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: Metallo-dependent phosphatases (From Topology) | T: Metallo-dependent phosphatases | F: Metallophos_2 | ECOD (1.6) |
A | Metallophos_2 | e1su1A1 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: Metallo-dependent phosphatases (From Topology) | T: Metallo-dependent phosphatases | F: Metallophos_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.60.21.10 | Alpha Beta | 4-Layer Sandwich | Purple Acid Phosphatase | chain A, domain 2 | CATH (4.3.0) |
C | 3.60.21.10 | Alpha Beta | 4-Layer Sandwich | Purple Acid Phosphatase | chain A, domain 2 | CATH (4.3.0) |
D | 3.60.21.10 | Alpha Beta | 4-Layer Sandwich | Purple Acid Phosphatase | chain A, domain 2 | CATH (4.3.0) |
A | 3.60.21.10 | Alpha Beta | 4-Layer Sandwich | Purple Acid Phosphatase | chain A, domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00149 | Calcineurin-like phosphoesterase (Metallophos) | Calcineurin-like phosphoesterase | This family includes a diverse range of phosphoesterases [1], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD Swiss:P13457 or ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Hypothetical protein yfcE |
| - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR020935 | Phosphodiesterase YfcE, conserved site | Conserved Site | |
IPR000979 | Phosphodiesterase MJ0936/Vps29 | Family | |
IPR041802 | YfcE-like, metallophosphatase domain | Domain | |
IPR024654 | Calcineurin-like phosphoesterase domain, lpxH-type | Domain | |
IPR029052 | Metallo-dependent phosphatase-like | Homologous Superfamily |