Fab fragment (MN14C11.6) in complex with a peptide antigen derived from Neisseria meningitidis P1.7 serosubtype antigen and domain II from Streptococcal protein G
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C [auth L] | Copper-bind | e1qkzL1 | A: beta barrels | X: Phage tail fiber protein trimerization domain | H: beta-Prism I | T: beta-Prism I | F: Copper-bind | ECOD (v294.2) |
| B [auth H] | Copper-bind | e1qkzH1 | A: beta barrels | X: Phage tail fiber protein trimerization domain | H: beta-Prism I | T: beta-Prism I | F: Copper-bind | ECOD (v294.2) |
| A | Polyketide_cyc2 | e1qkzA1 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: Polyketide_cyc2 | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C [auth L] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
| B [auth H] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
| A | 3.10.20.10 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
| Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
|---|---|---|---|---|---|---|---|---|
| C [auth L] | MN14C11.6 | L-KAPPA | Mus musculus (house mouse) | IGKV1-110*01, IGKJ1*01, IGKJ1*02, IGKJ2*01, IGKC*01, IGKC*02 | V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA | IG | FAB-GAMMA-2A_KAPPA | IMGT (202617-0) |
| B [auth H] | MN14C11.6 | VH-CH1 | Mus musculus (house mouse) | IGHV5-4*02, IGHJ4*01, IGHG2A*01, IGHG2A*02 | V-DOMAIN VH, C-DOMAIN CH1 | IG | FAB-GAMMA-2A_KAPPA | IMGT (202617-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
| Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
|---|---|---|---|---|---|
| C [auth L] | Light Chain | IGKV1 | Kappa | major outer membrane protein p1.16 | SAbDab (2026-05-08) |
| B [auth H] | Heavy Chain | IGHV5 | - | major outer membrane protein p1.16 | SAbDab (2026-05-08) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| D [auth P] | MAJOR OUTER MEMBRANE PROTEIN P1.16 | |||
| C [auth L] | ANTIBODY | - | - | - |
| B [auth H] | ANTIBODY | - | - | - |
| PROTEIN G-PRIME | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| D [auth P] | IPR050298 | Gram-negative bacterial outer membrane porin | Family |
| D [auth P] | IPR033900 | Porin domain, Gram-negative type | Domain |
| D [auth P] | IPR023614 | Porin domain superfamily | Homologous Superfamily |
| D [auth P] | IPR002299 | Porin, Neisseria sp. type | Family |
| D [auth P] | IPR001702 | Porin, Gram-negative type | Family |
| D [auth P] | IPR013793 | Porin, Gram-negative type, conserved site | Conserved Site |
| IPR009063 | Immunoglobulin/albumin-binding domain superfamily | Homologous Superfamily | |
| IPR005877 | YSIRK Gram-positive signal peptide | Domain | |
| IPR000724 | IgG-binding B | Domain | |
| IPR019950 | M protein-type anchor motif | Conserved Site | |
| IPR035152 | GA-like domain | Domain | |
| IPR019931 | LPXTG cell wall anchor motif | Conserved Site |














