1O75
Tp47, the 47-Kilodalton Lipoprotein of Treponema pallidum
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Tp47 lipoprotein, N-terminal domain | 8031694 | 4002797 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Tp47 lipoprotein, middle and C-terminal domains | 8055360 | 4007560 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Tp47 lipoprotein, middle and C-terminal domains | 8055546 | 4007560 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Tp47 lipoprotein, N-terminal domain | 8044072 | 3001762 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Tp47 lipoprotein, middle and C-terminal domains | 8055361 | 3002066 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Tp47 lipoprotein, middle and C-terminal domains | 8055547 | 3002066 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Tp47 lipoprotein, middle and C-terminal domains | 8055361 | 3002066 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Tp47 lipoprotein, middle and C-terminal domains | 8055547 | 3002066 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Tp47 lipoprotein, N-terminal domain | 8044072 | 3001762 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PBP-Tp47_c | e1o75A1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PBP-Tp47_c | ECOD (1.6) |
A | TcfC_like | e1o75A2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: TcfC_like | ECOD (1.6) |
A | PBP-Tp47_a_like | e1o75A4 | A: a+b two layers | X: Tp47 lipoprotein N-terminal domain | H: Tp47 lipoprotein N-terminal domain first subdomain (From Topology) | T: Tp47 lipoprotein N-terminal domain first subdomain | F: PBP-Tp47_a_like | ECOD (1.6) |
A | PBP-Tp47_a | e1o75A5 | A: a+b two layers | X: Tp47 lipoprotein N-terminal domain | H: Tp47 lipoprotein N-terminal domain second subdomain (From Topology) | T: Tp47 lipoprotein N-terminal domain second subdomain | F: PBP-Tp47_a | ECOD (1.6) |
B | PBP-Tp47_c | e1o75B1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PBP-Tp47_c | ECOD (1.6) |
B | TcfC_like | e1o75B2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: TcfC_like | ECOD (1.6) |
B | PBP-Tp47_a_like | e1o75B4 | A: a+b two layers | X: Tp47 lipoprotein N-terminal domain | H: Tp47 lipoprotein N-terminal domain first subdomain (From Topology) | T: Tp47 lipoprotein N-terminal domain first subdomain | F: PBP-Tp47_a_like | ECOD (1.6) |
B | PBP-Tp47_a | e1o75B3 | A: a+b two layers | X: Tp47 lipoprotein N-terminal domain | H: Tp47 lipoprotein N-terminal domain second subdomain (From Topology) | T: Tp47 lipoprotein N-terminal domain second subdomain | F: PBP-Tp47_a | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.1490.200 | Alpha Beta | 2-Layer Sandwich | Dna Ligase | domain 1 | CATH (4.3.0) |
A | 2.30.30.470 | Mainly Beta | Roll | SH3 type barrels. | Penicillin-binding protein Tp47, domain B | CATH (4.3.0) |
A | 2.60.40.1300 | Mainly Beta | Sandwich | Immunoglobulin-like | Penicillin-binding protein Tp47, domain C | CATH (4.3.0) |
A | 2.60.40.1270 | Mainly Beta | Sandwich | Immunoglobulin-like | Penicillin-binding protein Tp47, domain D | CATH (4.3.0) |
B | 3.30.1490.200 | Alpha Beta | 2-Layer Sandwich | Dna Ligase | domain 1 | CATH (4.3.0) |
B | 2.30.30.470 | Mainly Beta | Roll | SH3 type barrels. | Penicillin-binding protein Tp47, domain B | CATH (4.3.0) |
B | 2.60.40.1300 | Mainly Beta | Sandwich | Immunoglobulin-like | Penicillin-binding protein Tp47, domain C | CATH (4.3.0) |
B | 2.60.40.1270 | Mainly Beta | Sandwich | Immunoglobulin-like | Penicillin-binding protein Tp47, domain D | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF14888 | Penicillin-binding protein Tp47 domain C (PBP-Tp47_c) | Penicillin-binding protein Tp47 domain C | Domain C is the largest domain in this unusual penicillin-binding protein PBP), Tp47. This domain is mainly characterised by an immunoglobulin fold with two opposing beta-sheets that form the typical barrel-like structure. In contrast to the classica ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
47 KDA MEMBRANE ANTIGEN |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR038698 | Tp47, domain C superfamily | Homologous Superfamily | |
IPR029221 | Penicillin-binding protein Tp47 domain A | Domain | |
IPR029220 | Penicillin-binding protein Tp47, domain D | Homologous Superfamily | |
IPR029218 | Penicillin-binding protein Tp47, domain C | Domain | |
IPR038031 | Tp47 lipoprotein, middle and C-terminal domain | Homologous Superfamily | |
IPR036154 | Tp47, N-terminal domain superfamily | Homologous Superfamily |