1MKM
CRYSTAL STRUCTURE OF THE THERMOTOGA MARITIMA ICLR
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | IclR N-terminal domain-like | 8002839 | 4000318 | SCOP2 (2022-06-29) |
A | SCOP2 Family | IclR ligand-binding domain-like | 8002842 | 4000191 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Winged helix DNA-binding domain | 8002840 | 3000034 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | GAF domain-like | 8002843 | 3000080 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Winged helix DNA-binding domain | 8002840 | 3000034 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | GAF domain-like | 8002843 | 3000080 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | HTH_IclR | e1mkmA1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: HTH_IclR | ECOD (1.6) |
A | IclR | e1mkmA2 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: IclR | ECOD (1.6) |
B | HTH_IclR | e1mkmB1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: HTH_IclR | ECOD (1.6) |
B | IclR | e1mkmB2 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: IclR | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
A | 1.20.5.640 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | Single helix bin | CATH (4.3.0) |
A | 3.30.450.40 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | GAF domain | CATH (4.3.0) |
B | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
B | 3.30.450.40 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | GAF domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01614 | Bacterial transcriptional regulator IclR C-terminal (IclR_C) | Bacterial transcriptional regulator | - | Family | |
PF09339 | IclR helix-turn-helix domain (HTH_IclR) | IclR helix-turn-helix domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR050707 | HTH-type Transcriptional Regulators in Metabolic Pathways | Family | |
IPR029016 | GAF-like domain superfamily | Homologous Superfamily | |
IPR005471 | Transcription regulator IclR, N-terminal | Domain | |
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR011991 | ArsR-like helix-turn-helix domain | Domain | |
IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily | |
IPR014757 | Transcription regulator IclR, C-terminal | Domain |