1G5Q | pdb_00001g5q

EPID H67N COMPLEXED WITH SUBSTRATE PEPTIDE DSYTC

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
G [auth L]	d1g5ql_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Epidermin modifying enzyme (peptidyl-cysteine decarboxylase) EpiD	(Staphylococcus epidermidis ) [TaxId: 1282 ],	SCOPe (2.08)
E [auth G]	d1g5qg_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Epidermin modifying enzyme (peptidyl-cysteine decarboxylase) EpiD	(Staphylococcus epidermidis ) [TaxId: 1282 ],	SCOPe (2.08)
C [auth D]	d1g5qd_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Epidermin modifying enzyme (peptidyl-cysteine decarboxylase) EpiD	(Staphylococcus epidermidis ) [TaxId: 1282 ],	SCOPe (2.08)
A	d1g5qa_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Epidermin modifying enzyme (peptidyl-cysteine decarboxylase) EpiD	(Staphylococcus epidermidis ) [TaxId: 1282 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
G [auth L]	SCOP2B Superfamily	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	8032599	3001775	SCOP2B (2022-06-29)
E [auth G]	SCOP2B Superfamily	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	8032599	3001775	SCOP2B (2022-06-29)
C [auth D]	SCOP2B Superfamily	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	8032599	3001775	SCOP2B (2022-06-29)
A	SCOP2 Family	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	8020219	4003907	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	8032599	3001775	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
G [auth L]	Abhydrolase_1	e1g5qL1	A: alpha arrays	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: C-terminal subdomain in Lon-related proteases catalytic domains	F: Abhydrolase_1	ECOD (v295.2)
E [auth G]	Abhydrolase_1	e1g5qG1	A: alpha arrays	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: C-terminal subdomain in Lon-related proteases catalytic domains	F: Abhydrolase_1	ECOD (v295.2)
C [auth D]	Abhydrolase_1	e1g5qD1	A: alpha arrays	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: C-terminal subdomain in Lon-related proteases catalytic domains	F: Abhydrolase_1	ECOD (v295.2)
A	Flavoprotein	e1g5qA1	A: alpha arrays	X: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	H: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	T: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	F: Flavoprotein	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
G [auth L]	3.40.50.1950	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Flavin prenyltransferase-like	CATH (4.3.0)
E [auth G]	3.40.50.1950	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Flavin prenyltransferase-like	CATH (4.3.0)
C [auth D]	3.40.50.1950	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Flavin prenyltransferase-like	CATH (4.3.0)
A	3.40.50.1950	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Flavin prenyltransferase-like	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth M], D [auth N], F [auth O], H [auth P]	LANTIBIOTIC EPIDERMIN	protein binding binding signaling receptor binding	defense response to bacterium biological process involved in interspecies interaction between organisms response to stimulus response to other organism defense response response to bacterium response to stress response to external stimulus response to external biotic stimulus response to biotic stimulus cellular process disruption of cell in another organism disruption of anatomical structure in another organism killing of cells of another organism defense response to bacterium biological process involved in interspecies interaction between organisms response to stimulus response to other organism defense response response to bacterium response to stress response to external stimulus response to external biotic stimulus response to biotic stimulus cellular process disruption of cell in another organism disruption of anatomical structure in another organism killing of cells of another organism cell killing	cellular anatomical structure extracellular region
A, C [auth D], E [auth G], G [auth L]	EPIDERMIN MODIFYING ENZYME EPID	FMN binding binding nucleoside phosphate binding ion binding anion binding nucleotide binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding phosphopantothenoylcysteine decarboxylase activity carboxy-lyase activity lyase activity catalytic activity FMN binding binding nucleoside phosphate binding ion binding anion binding nucleotide binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding phosphopantothenoylcysteine decarboxylase activity carboxy-lyase activity lyase activity catalytic activity carbon-carbon lyase activity	nucleoside phosphate metabolic process coenzyme A biosynthetic process primary metabolic process nucleobase-containing compound biosynthetic process purine-containing compound metabolic process nucleobase-containing compound metabolic process sulfur compound biosynthetic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process nucleobase-containing small molecule metabolic process purine-containing compound biosynthetic process nucleoside phosphate biosynthetic process metabolic process nucleoside phosphate metabolic process coenzyme A biosynthetic process primary metabolic process nucleobase-containing compound biosynthetic process purine-containing compound metabolic process nucleobase-containing compound metabolic process sulfur compound biosynthetic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process nucleobase-containing small molecule metabolic process purine-containing compound biosynthetic process nucleoside phosphate biosynthetic process metabolic process cellular process small molecule metabolic process sulfur compound metabolic process phosphorus metabolic process coenzyme A metabolic process	protein-containing complex cellular anatomical structure intracellular anatomical structure catalytic complex cytoplasm phosphopantothenoylcysteine decarboxylase complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth M], D [auth N], F [auth O], H [auth P]	IPR006079	Lantibiotic, Type A, Bacillales-type	Family
A, C [auth D], E [auth G], G [auth L]	IPR036551	Flavin prenyltransferase-like	Homologous Superfamily
A, C [auth D], E [auth G], G [auth L]	IPR003382	Flavoprotein	Domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.