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 12DM | pdb_000012dm

AHA hibernation factor bound to the 70S ribosome of Haloferax volcanii


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth E]Large ribosomal subunit protein uL6
H [auth D]Large ribosomal subunit protein uL5
G [auth C]Large ribosomal subunit protein uL4
F [auth B]Large ribosomal subunit protein uL3
AB [auth 1]23S rRNA---
ZA [auth x]Small ribosomal subunit protein eS28
YA [auth w]Small ribosomal subunit protein eS27
XA [auth v]Small ribosomal subunit protein eS24
E [auth A]Large ribosomal subunit protein uL2
WA [auth u]Small ribosomal subunit protein eS19
VA [auth t]Small ribosomal subunit protein uS19
UA [auth s]Small ribosomal subunit protein uS17
TA [auth r]Small ribosomal subunit protein uS15
SA [auth q]Small ribosomal subunit protein uS14
RA [auth p]Small ribosomal subunit protein uS13
QA [auth o]Small ribosomal subunit protein uS12
PA [auth n]Small ribosomal subunit protein uS11
OA [auth m]Small ribosomal subunit protein uS10
NA [auth l]Small ribosomal subunit protein uS9
D [auth 3]16S rRNA---
MA [auth k]Small ribosomal subunit protein eS8
LA [auth j]Small ribosomal subunit protein uS8
KA [auth i]Small ribosomal subunit protein uS7
JA [auth h]Small ribosomal subunit protein eS6
IA [auth g]Small ribosomal subunit protein eS4
HA [auth f]Small ribosomal subunit protein uS4
GA [auth e]Small ribosomal subunit protein eS1
FA [auth d]Large ribosomal subunit protein eL42
EA [auth c]50S ribosomal protein L37Ae
DA [auth b]Large ribosomal subunit protein eL39
C [auth 0]CBS domain protein- - -
CA [auth a]Large ribosomal subunit protein eL37
BA [auth Z]Large ribosomal subunit protein eL32
AA [auth Y]Large ribosomal subunit protein eL31
Z [auth X]Large ribosomal subunit protein uL30
Y [auth W]Large ribosomal subunit protein uL29
X [auth V]Large ribosomal subunit protein eL24 -
W [auth U]Large ribosomal subunit protein uL24
V [auth T]Large ribosomal subunit protein uL23
U [auth S]Large ribosomal subunit protein uL22
T [auth R]Large ribosomal subunit protein eL21
B [auth 4]E-site tRNA---
S [auth Q]Large ribosomal subunit protein eL19
R [auth P]Large ribosomal subunit protein eL18
Q [auth O]Large ribosomal subunit protein eL20
P [auth N]Large ribosomal subunit protein uL18
O [auth M]Large ribosomal subunit protein eL15
N [auth L]Large ribosomal subunit protein uL15
M [auth K]Large ribosomal subunit protein uL14
L [auth J]Large ribosomal subunit protein uL13
K [auth H]Large ribosomal subunit protein uL16
J [auth F]Large ribosomal subunit protein eL8
A [auth 2]5S rRNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth E]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
I [auth E]IPR019907Large ribosomal subunit protein uL6, archaeaFamily
I [auth E]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
I [auth E]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
I [auth E]IPR000702Large ribosomal subunit protein uL6-likeFamily
H [auth D]IPR057266Large ribosomal subunit protein uL5, eukaryota/archaeaFamily
H [auth D]IPR022804Large ribosomal subunit protein uL5, archaeaFamily
H [auth D]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
H [auth D]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
H [auth D]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
H [auth D]IPR002132Large ribosomal subunit protein uL5Family
G [auth C]IPR019970Large ribosomal subunit protein uL4, archaeaFamily
G [auth C]IPR002136Large ribosomal subunit protein uL4Family
G [auth C]IPR013000Large ribosomal subunit protein uL4, eukaryota/archaea, conserved siteConserved Site
G [auth C]IPR045240Large ribosomal subunit protein uL4, eukaryota/archaeaFamily
G [auth C]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
F [auth B]IPR019928Large ribosomal subunit protein uL3, archaeaFamily
F [auth B]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
F [auth B]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
F [auth B]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
F [auth B]IPR000597Large ribosomal subunit protein uL3Family
F [auth B]IPR045077Large ribosomal subunit protein uL3, archaea/eukaryotaFamily
ZA [auth x]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
ZA [auth x]IPR000289Small ribosomal subunit protein eS28Family
YA [auth w]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
YA [auth w]IPR000592Small ribosomal subunit protein eS27Family
YA [auth w]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
XA [auth v]IPR001976Small ribosomal subunit protein eS24Family
XA [auth v]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
XA [auth v]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
XA [auth v]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
E [auth A]IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
E [auth A]IPR023672Large ribosomal subunit protein uL2, archaea/eukaryotaFamily
E [auth A]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
E [auth A]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
E [auth A]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
E [auth A]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
E [auth A]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
E [auth A]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
E [auth A]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
E [auth A]IPR002171Large ribosomal subunit protein uL2Family
WA [auth u]IPR001266Small ribosomal subunit protein eS19Family
WA [auth u]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
WA [auth u]IPR027548Small ribosomal subunit protein eS19, archaeaFamily
WA [auth u]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
VA [auth t]IPR002222Small ribosomal subunit protein uS19Family
VA [auth t]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
VA [auth t]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
VA [auth t]IPR005713Small ribosomal subunit protein uS19, eukaryota/archaeaFamily
UA [auth s]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
UA [auth s]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
UA [auth s]IPR000266Small ribosomal subunit protein uS17Family
UA [auth s]IPR019978Small ribosomal subunit protein uS17, archaealFamily
UA [auth s]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
TA [auth r]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
TA [auth r]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
TA [auth r]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotaFamily
TA [auth r]IPR000589Small ribosomal subunit protein uS15Family
SA [auth q]IPR001209Small ribosomal subunit protein uS14Family
SA [auth q]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
SA [auth q]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
SA [auth q]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
SA [auth q]IPR023676Small ribosomal subunit protein uS14, archaeaFamily
RA [auth p]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
RA [auth p]IPR001892Small ribosomal subunit protein uS13Family
RA [auth p]IPR019977Small ribosomal subunit protein uS13, archaeaFamily
RA [auth p]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
RA [auth p]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
QA [auth o]IPR006032Small ribosomal subunit protein uS12Family
QA [auth o]IPR022863Ribosomal protein uS12, archaeaFamily
QA [auth o]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
QA [auth o]IPR005680Small ribosomal subunit protein uS12, eukaryota/archaeaFamily
PA [auth n]IPR019961Small ribosomal subunit protein uS11, archaeaFamily
PA [auth n]IPR001971Small ribosomal subunit protein uS11Family
PA [auth n]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
PA [auth n]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
OA [auth m]IPR001848Small ribosomal subunit protein uS10Family
OA [auth m]IPR027486Small ribosomal subunit protein uS10 domainDomain
OA [auth m]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
OA [auth m]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
OA [auth m]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
NA [auth l]IPR019958Small ribosomal subunit protein uS9, archaeaFamily
NA [auth l]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
NA [auth l]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
NA [auth l]IPR000754Small ribosomal subunit protein uS9Family
NA [auth l]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
MA [auth k]IPR001047Small ribosomal subunit protein eS8Family
MA [auth k]IPR020919Small ribosomal subunit protein eS8, archaeaFamily
MA [auth k]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
LA [auth j]IPR000630Small ribosomal subunit protein uS8Family
LA [auth j]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
LA [auth j]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
KA [auth i]IPR000235Small ribosomal subunit protein uS7Family
KA [auth i]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
KA [auth i]IPR026018Small ribosomal subunit protein uS7, archaeaFamily
KA [auth i]IPR023798Small ribosomal subunit protein uS7 domainDomain
KA [auth i]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
JA [auth h]IPR001377Small ribosomal subunit protein eS6Family
JA [auth h]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
JA [auth h]IPR020924Small ribosomal subunit protein eS6, archaeaFamily
IA [auth g]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
IA [auth g]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
IA [auth g]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
IA [auth g]IPR013845Small ribosomal subunit protein eS4, central regionDomain
IA [auth g]IPR000876Small ribosomal subunit protein eS4Family
IA [auth g]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IA [auth g]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
IA [auth g]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
HA [auth f]IPR002942RNA-binding S4 domainDomain
HA [auth f]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
HA [auth f]IPR022802Small ribosomal subunit protein uS4, archaeaFamily
HA [auth f]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
HA [auth f]IPR022801Small ribosomal subunit protein uS4Family
HA [auth f]IPR005710Small ribosomal subunit protein uS4, eukaryota/archaeaFamily
GA [auth e]IPR001593Small ribosomal subunit protein eS1Family
GA [auth e]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
GA [auth e]IPR030838Small ribosomal subunit protein eS1, archaeaFamily
FA [auth d]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
FA [auth d]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
FA [auth d]IPR000552Large ribosomal subunit protein eL42Family
EA [auth c]IPR002674Large ribosomal subunit protein eL43Family
EA [auth c]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
EA [auth c]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
EA [auth c]IPR050522Eukaryotic ribosomal protein eL43Family
DA [auth b]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
DA [auth b]IPR000077Large ribosomal subunit protein eL39Family
DA [auth b]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
C [auth 0]IPR051462CBS domain-containing proteinFamily
C [auth 0]IPR014651Uncharacterised conserved protein, 2xCBS, MJ1404 typeFamily
C [auth 0]IPR046342CBS domain superfamilyHomologous Superfamily
C [auth 0]IPR000644CBS domainDomain
C [auth 0]IPR036567Ribosome hibernation promotion factor-likeHomologous Superfamily
CA [auth a]IPR001569Large ribosomal subunit protein eL37Family
CA [auth a]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
CA [auth a]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
CA [auth a]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
BA [auth Z]IPR023654Large ribosomal subunit protein eL32, archaeaFamily
BA [auth Z]IPR001515Large ribosomal subunit protein eL32Family
BA [auth Z]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
BA [auth Z]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
BA [auth Z]IPR060101SAM-like helix-hairpin-helix tandemDomain
BA [auth Z]IPR010995DNA repair Rad51/transcription factor NusA, alpha-helicalHomologous Superfamily
BA [auth Z]IPR003583Helix-hairpin-helix DNA-binding motif, class 1Domain
AA [auth Y]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
AA [auth Y]IPR000054Large ribosomal subunit protein eL31Family
Z [auth X]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
Z [auth X]IPR039699Large ribosomal subunit protein uL30Family
Z [auth X]IPR035808Large ribosomal subunit protein uL30, eukaryota/archaeaDomain
Z [auth X]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
Z [auth X]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
Z [auth X]IPR005997Large ribosomal subunit protein uL30, archaeaFamily
Y [auth W]IPR001854Large ribosomal subunit protein uL29Family
Y [auth W]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
Y [auth W]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
X [auth V]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
X [auth V]IPR055345Large ribosomal subunit protein eL24-like, archaeaFamily
X [auth V]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
X [auth V]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
W [auth U]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
W [auth U]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
W [auth U]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
W [auth U]IPR005824KOWDomain
W [auth U]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
V [auth T]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
V [auth T]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
V [auth T]IPR019985Large ribosomal subunit protein uL23Family
V [auth T]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
V [auth T]IPR013025Large ribosomal subunit protein uL23-likeFamily
U [auth S]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
U [auth S]IPR005721Large ribosomal subunit protein uL22, eukaryota/archaeaFamily
U [auth S]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
U [auth S]IPR001063Large ribosomal subunit protein uL22Family
U [auth S]IPR057265Large ribosomal subunit protein uL22, archaeaFamily
T [auth R]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
T [auth R]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
T [auth R]IPR022856Large ribosomal subunit protein eL21, archaeaFamily
T [auth R]IPR001147Large ribosomal subunit protein eL21Family
T [auth R]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
S [auth Q]IPR015974Large ribosomal subunit protein eL19, domain 3Homologous Superfamily
S [auth Q]IPR039547Large ribosomal subunit protein eL19Family
S [auth Q]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
S [auth Q]IPR057260Ribosomal protein L19e, C-terminal domainDomain
S [auth Q]IPR033936Large ribosomal subunit protein eL19, archaeaDomain
S [auth Q]IPR015973Large ribosomal subunit protein eL19, domain 2Homologous Superfamily
S [auth Q]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
S [auth Q]IPR057259Ribosomal protein L19e, N-terminal domainDomain
S [auth Q]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
S [auth Q]IPR000196Large ribosomal subunit protein eL19 domainDomain
R [auth P]IPR022947Large ribosomal subunit protein eL18, archaeaFamily
R [auth P]IPR021131Large ribosomal subunit protein uL15/eL18Domain
R [auth P]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
R [auth P]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
R [auth P]IPR000039Large ribosomal subunit protein eL18Family
R [auth P]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
Q [auth O]IPR028877Large ribosomal subunit protein eL20Family
Q [auth O]IPR023573Large ribosomal subunit protein eL20 domainDomain
P [auth N]IPR057268Large ribosomal subunit protein uL18Family
P [auth N]IPR057267Large ribosomal subunit protein uL18, archaeaFamily
P [auth N]IPR005485Large ribosomal subunit protein uL18, eukaryota/archaeaFamily
O [auth M]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
O [auth M]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
O [auth M]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
O [auth M]IPR020926Large ribosomal subunit protein eL15, archaealFamily
O [auth M]IPR000439Large ribosomal subunit protein eL15Family
N [auth L]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
N [auth L]IPR021131Large ribosomal subunit protein uL15/eL18Domain
N [auth L]IPR030878Large ribosomal subunit protein uL15Family
N [auth L]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
N [auth L]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
M [auth K]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
M [auth K]IPR000218Large ribosomal subunit protein uL14Family
M [auth K]IPR019971Large ribosomal subunit protein uL14, archaeaFamily
M [auth K]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
L [auth J]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
L [auth J]IPR005822Large ribosomal subunit protein uL13Family
L [auth J]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
L [auth J]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
L [auth J]IPR005755Large ribosomal subunit protein uL13, eukaryota/archaeaFamily
K [auth H]IPR001197Large ribosomal subunit protein uL16, eukaryota/archaeaFamily
K [auth H]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
K [auth H]IPR022981Large ribosomal subunit protein uL16, archaeaFamily
K [auth H]IPR047873Large ribosomal subunit protein uL16Family
J [auth F]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
J [auth F]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
J [auth F]IPR022481Large ribosomal subunit protein eL8, archaeaFamily
J [auth F]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
J [auth F]IPR018492Ribosomal protein eL8/Nhp2 familyFamily