9TLC | pdb_00009tlc

Cryo-EM Structure of the oligomeric LPOR:Chlide:NADPH Complexes RF-25

PDB DOI: https://doi.org/10.2210/pdb9TLC/pdb
EM Map EMD-56049: EMDB EMDataResource

Classification: PHOTOSYNTHESIS
Organism(s): Arabidopsis thaliana
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2025-12-10 Released: 2026-08-19
Deposition Author(s): Gabruk, M., Desfosses, A., Estrozi, L.F., Pintscher, S., Rawski, M.
Funding Organization(s): Polish National Science Centre

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.20 Å
Aggregation State: HELICAL ARRAY
Reconstruction Method: HELICAL

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

Validation slider image for 9TLC

This is version 1.0 of the entry. See complete history.

Literature

Cryo-EM Structure of the LPOR:Chlide:NADPH Complexes - improved resolution of a dimer building block form RF-25

Gabruk, M., Desfosses, A., Estrozi, L.F., Pintscher, S., Rawski, M., Wazny, G., Garbacz, A., Zbyradowski, M., Kruk, J., Fiedor, L.

To be published.

Macromolecule Content

Total Structure Weight: 1,938.43 kDa
Atom Count: 122,544
Modeled Residue Count: 15,264
Deposited Residue Count: 16,944
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Protochlorophyllide reductase B, chloroplastic	A [auth YE] AA [auth ZE] B [auth YF] BA [auth ZF] C [auth YG] A [auth YE], AA [auth ZE], B [auth YF], BA [auth ZF], C [auth YG], CA [auth ZG], D [auth YH], DA [auth ZH], E [auth YI], EA [auth ZI], F [auth YJ], FA [auth ZJ], G [auth YK], GA [auth ZK], H [auth YL], HA [auth ZL], I [auth YM], IA [auth ZM], J [auth YN], JA [auth ZN], K [auth YO], KA [auth ZO], L [auth YP], LA [auth ZP], M [auth YQ], MA [auth ZQ], N [auth YR], NA [auth ZR], O [auth YS], OA [auth ZS], P [auth YT], PA [auth ZT], Q [auth YU], QA [auth ZU], R [auth YV], RA [auth ZV], S [auth YW], SA [auth ZW], T [auth YX], TA [auth ZX], U [auth YY], UA [auth ZY], V [auth YZ], VA [auth ZZ], W [auth ZA], X [auth ZB], Y [auth ZC], Z [auth ZD]	353	Arabidopsis thaliana	Mutation(s): 0 Gene Names: PORB, At4g27440, F27G19.40 EC: 1.3.1.33
UniProt
Find proteins for P21218 (Arabidopsis thaliana) Explore P21218 Go to UniProtKB: P21218
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P21218
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 3 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
LMG (Subject of Investigation/LOI) Query on LMG Download:Ideal Coordinates CCD File SDF format, chain AB [auth YF] SDF format, chain AE [auth ZF] SDF format, chain BC [auth YO] SDF format, chain BF [auth ZO] SDF format, chain CD [auth YX] SDF format, chain CG [auth ZX] SDF format, chain DB [auth YG] SDF format, chain DE [auth ZG] SDF format, chain EC [auth YP] SDF format, chain EF [auth ZP] SDF format, chain FD [auth YY] SDF format, chain FG [auth ZY] SDF format, chain GB [auth YH] SDF format, chain GE [auth ZH] SDF format, chain HC [auth YQ] SDF format, chain HF [auth ZQ] SDF format, chain ID [auth YZ] SDF format, chain IG [auth ZZ] SDF format, chain JB [auth YI] SDF format, chain JE [auth ZI] SDF format, chain KC [auth YR] SDF format, chain KF [auth ZR] SDF format, chain LD [auth ZA] SDF format, chain MB [auth YJ] SDF format, chain ME [auth ZJ] SDF format, chain NC [auth YS] SDF format, chain NF [auth ZS] SDF format, chain OD [auth ZB] SDF format, chain PB [auth YK] SDF format, chain PE [auth ZK] SDF format, chain QC [auth YT] SDF format, chain QF [auth ZT] SDF format, chain RD [auth ZC] SDF format, chain SB [auth YL] SDF format, chain SE [auth ZL] SDF format, chain TC [auth YU] SDF format, chain TF [auth ZU] SDF format, chain UD [auth ZD] SDF format, chain VB [auth YM] SDF format, chain VE [auth ZM] SDF format, chain WC [auth YV] SDF format, chain WF [auth ZV] SDF format, chain XA [auth YE] SDF format, chain XD [auth ZE] SDF format, chain YB [auth YN] SDF format, chain YE [auth ZN] SDF format, chain ZC [auth YW] SDF format, chain ZF [auth ZW] MOL2 format, chain AB [auth YF] MOL2 format, chain AE [auth ZF] MOL2 format, chain BC [auth YO] MOL2 format, chain BF [auth ZO] MOL2 format, chain CD [auth YX] MOL2 format, chain CG [auth ZX] MOL2 format, chain DB [auth YG] MOL2 format, chain DE [auth ZG] MOL2 format, chain EC [auth YP] MOL2 format, chain EF [auth ZP] MOL2 format, chain FD [auth YY] MOL2 format, chain FG [auth ZY] MOL2 format, chain GB [auth YH] MOL2 format, chain GE [auth ZH] MOL2 format, chain HC [auth YQ] MOL2 format, chain HF [auth ZQ] MOL2 format, chain ID [auth YZ] MOL2 format, chain IG [auth ZZ] MOL2 format, chain JB [auth YI] MOL2 format, chain JE [auth ZI] MOL2 format, chain KC [auth YR] MOL2 format, chain KF [auth ZR] MOL2 format, chain LD [auth ZA] MOL2 format, chain MB [auth YJ] MOL2 format, chain ME [auth ZJ] MOL2 format, chain NC [auth YS] MOL2 format, chain NF [auth ZS] MOL2 format, chain OD [auth ZB] MOL2 format, chain PB [auth YK] MOL2 format, chain PE [auth ZK] MOL2 format, chain QC [auth YT] MOL2 format, chain QF [auth ZT] MOL2 format, chain RD [auth ZC] MOL2 format, chain SB [auth YL] MOL2 format, chain SE [auth ZL] MOL2 format, chain TC [auth YU] MOL2 format, chain TF [auth ZU] MOL2 format, chain UD [auth ZD] MOL2 format, chain VB [auth YM] MOL2 format, chain VE [auth ZM] MOL2 format, chain WC [auth YV] MOL2 format, chain WF [auth ZV] MOL2 format, chain XA [auth YE] MOL2 format, chain XD [auth ZE] MOL2 format, chain YB [auth YN] MOL2 format, chain YE [auth ZN] MOL2 format, chain ZC [auth YW] MOL2 format, chain ZF [auth ZW] mmCIF format, chain AB [auth YF] mmCIF format, chain AE [auth ZF] mmCIF format, chain BC [auth YO] mmCIF format, chain BF [auth ZO] mmCIF format, chain CD [auth YX] mmCIF format, chain CG [auth ZX] mmCIF format, chain DB [auth YG] mmCIF format, chain DE [auth ZG] mmCIF format, chain EC [auth YP] mmCIF format, chain EF [auth ZP] mmCIF format, chain FD [auth YY] mmCIF format, chain FG [auth ZY] mmCIF format, chain GB [auth YH] mmCIF format, chain GE [auth ZH] mmCIF format, chain HC [auth YQ] mmCIF format, chain HF [auth ZQ] mmCIF format, chain ID [auth YZ] mmCIF format, chain IG [auth ZZ] mmCIF format, chain JB [auth YI] mmCIF format, chain JE [auth ZI] mmCIF format, chain KC [auth YR] mmCIF format, chain KF [auth ZR] mmCIF format, chain LD [auth ZA] mmCIF format, chain MB [auth YJ] mmCIF format, chain ME [auth ZJ] mmCIF format, chain NC [auth YS] mmCIF format, chain NF [auth ZS] mmCIF format, chain OD [auth ZB] mmCIF format, chain PB [auth YK] mmCIF format, chain PE [auth ZK] mmCIF format, chain QC [auth YT] mmCIF format, chain QF [auth ZT] mmCIF format, chain RD [auth ZC] mmCIF format, chain SB [auth YL] mmCIF format, chain SE [auth ZL] mmCIF format, chain TC [auth YU] mmCIF format, chain TF [auth ZU] mmCIF format, chain UD [auth ZD] mmCIF format, chain VB [auth YM] mmCIF format, chain VE [auth ZM] mmCIF format, chain WC [auth YV] mmCIF format, chain WF [auth ZV] mmCIF format, chain XA [auth YE] mmCIF format, chain XD [auth ZE] mmCIF format, chain YB [auth YN] mmCIF format, chain YE [auth ZN] mmCIF format, chain ZC [auth YW] mmCIF format, chain ZF [auth ZW]	AB [auth YF] AE [auth ZF] BC [auth YO] BF [auth ZO] CD [auth YX] AB [auth YF], AE [auth ZF], BC [auth YO], BF [auth ZO], CD [auth YX], CG [auth ZX], DB [auth YG], DE [auth ZG], EC [auth YP], EF [auth ZP], FD [auth YY], FG [auth ZY], GB [auth YH], GE [auth ZH], HC [auth YQ], HF [auth ZQ], ID [auth YZ], IG [auth ZZ], JB [auth YI], JE [auth ZI], KC [auth YR], KF [auth ZR], LD [auth ZA], MB [auth YJ], ME [auth ZJ], NC [auth YS], NF [auth ZS], OD [auth ZB], PB [auth YK], PE [auth ZK], QC [auth YT], QF [auth ZT], RD [auth ZC], SB [auth YL], SE [auth ZL], TC [auth YU], TF [auth ZU], UD [auth ZD], VB [auth YM], VE [auth ZM], WC [auth YV], WF [auth ZV], XA [auth YE], XD [auth ZE], YB [auth YN], YE [auth ZN], ZC [auth YW], ZF [auth ZW]	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE C₄₅ H₈₆ O₁₀ DCLTVZLYPPIIID-CVELTQQQSA-N		Interactions Focus chain AB [auth YF] Focus chain AE [auth ZF] Focus chain BC [auth YO] Focus chain BF [auth ZO] Focus chain CD [auth YX] Focus chain CG [auth ZX] Focus chain DB [auth YG] Focus chain DE [auth ZG] Focus chain EC [auth YP] Focus chain EF [auth ZP] Focus chain FD [auth YY] Focus chain FG [auth ZY] Focus chain GB [auth YH] Focus chain GE [auth ZH] Focus chain HC [auth YQ] Focus chain HF [auth ZQ] Focus chain ID [auth YZ] Focus chain IG [auth ZZ] Focus chain JB [auth YI] Focus chain JE [auth ZI] Focus chain KC [auth YR] Focus chain KF [auth ZR] Focus chain LD [auth ZA] Focus chain MB [auth YJ] Focus chain ME [auth ZJ] Focus chain NC [auth YS] Focus chain NF [auth ZS] Focus chain OD [auth ZB] Focus chain PB [auth YK] Focus chain PE [auth ZK] Focus chain QC [auth YT] Focus chain QF [auth ZT] Focus chain RD [auth ZC] Focus chain SB [auth YL] Focus chain SE [auth ZL] Focus chain TC [auth YU] Focus chain TF [auth ZU] Focus chain UD [auth ZD] Focus chain VB [auth YM] Focus chain VE [auth ZM] Focus chain WC [auth YV] Focus chain WF [auth ZV] Focus chain XA [auth YE] Focus chain XD [auth ZE] Focus chain YB [auth YN] Focus chain YE [auth ZN] Focus chain ZC [auth YW] Focus chain ZF [auth ZW] Interactions & Density Focus chain AB [auth YF] Focus chain AE [auth ZF] Focus chain BC [auth YO] Focus chain BF [auth ZO] Focus chain CD [auth YX] Focus chain CG [auth ZX] Focus chain DB [auth YG] Focus chain DE [auth ZG] Focus chain EC [auth YP] Focus chain EF [auth ZP] Focus chain FD [auth YY] Focus chain FG [auth ZY] Focus chain GB [auth YH] Focus chain GE [auth ZH] Focus chain HC [auth YQ] Focus chain HF [auth ZQ] Focus chain ID [auth YZ] Focus chain IG [auth ZZ] Focus chain JB [auth YI] Focus chain JE [auth ZI] Focus chain KC [auth YR] Focus chain KF [auth ZR] Focus chain LD [auth ZA] Focus chain MB [auth YJ] Focus chain ME [auth ZJ] Focus chain NC [auth YS] Focus chain NF [auth ZS] Focus chain OD [auth ZB] Focus chain PB [auth YK] Focus chain PE [auth ZK] Focus chain QC [auth YT] Focus chain QF [auth ZT] Focus chain RD [auth ZC] Focus chain SB [auth YL] Focus chain SE [auth ZL] Focus chain TC [auth YU] Focus chain TF [auth ZU] Focus chain UD [auth ZD] Focus chain VB [auth YM] Focus chain VE [auth ZM] Focus chain WC [auth YV] Focus chain WF [auth ZV] Focus chain XA [auth YE] Focus chain XD [auth ZE] Focus chain YB [auth YN] Focus chain YE [auth ZN] Focus chain ZC [auth YW] Focus chain ZF [auth ZW]
NDP (Subject of Investigation/LOI) Query on NDP Download:Ideal Coordinates CCD File SDF format, chain AC [auth YO] SDF format, chain AF [auth ZO] SDF format, chain BD [auth YX] SDF format, chain BG [auth ZX] SDF format, chain CB [auth YG] SDF format, chain CE [auth ZG] SDF format, chain DC [auth YP] SDF format, chain DF [auth ZP] SDF format, chain ED [auth YY] SDF format, chain EG [auth ZY] SDF format, chain FB [auth YH] SDF format, chain FE [auth ZH] SDF format, chain GC [auth YQ] SDF format, chain GF [auth ZQ] SDF format, chain HD [auth YZ] SDF format, chain HG [auth ZZ] SDF format, chain IB [auth YI] SDF format, chain IE [auth ZI] SDF format, chain JC [auth YR] SDF format, chain JF [auth ZR] SDF format, chain KD [auth ZA] SDF format, chain LB [auth YJ] SDF format, chain LE [auth ZJ] SDF format, chain MC [auth YS] SDF format, chain MF [auth ZS] SDF format, chain ND [auth ZB] SDF format, chain OB [auth YK] SDF format, chain OE [auth ZK] SDF format, chain PC [auth YT] SDF format, chain PF [auth ZT] SDF format, chain QD [auth ZC] SDF format, chain RB [auth YL] SDF format, chain RE [auth ZL] SDF format, chain SC [auth YU] SDF format, chain SF [auth ZU] SDF format, chain TD [auth ZD] SDF format, chain UB [auth YM] SDF format, chain UE [auth ZM] SDF format, chain VC [auth YV] SDF format, chain VF [auth ZV] SDF format, chain WA [auth YE] SDF format, chain WD [auth ZE] SDF format, chain XB [auth YN] SDF format, chain XE [auth ZN] SDF format, chain YC [auth YW] SDF format, chain YF [auth ZW] SDF format, chain ZA [auth YF] SDF format, chain ZD [auth ZF] MOL2 format, chain AC [auth YO] MOL2 format, chain AF [auth ZO] MOL2 format, chain BD [auth YX] MOL2 format, chain BG [auth ZX] MOL2 format, chain CB [auth YG] MOL2 format, chain CE [auth ZG] MOL2 format, chain DC [auth YP] MOL2 format, chain DF [auth ZP] MOL2 format, chain ED [auth YY] MOL2 format, chain EG [auth ZY] MOL2 format, chain FB [auth YH] MOL2 format, chain FE [auth ZH] MOL2 format, chain GC [auth YQ] MOL2 format, chain GF [auth ZQ] MOL2 format, chain HD [auth YZ] MOL2 format, chain HG [auth ZZ] MOL2 format, chain IB [auth YI] MOL2 format, chain IE [auth ZI] MOL2 format, chain JC [auth YR] MOL2 format, chain JF [auth ZR] MOL2 format, chain KD [auth ZA] MOL2 format, chain LB [auth YJ] MOL2 format, chain LE [auth ZJ] MOL2 format, chain MC [auth YS] MOL2 format, chain MF [auth ZS] MOL2 format, chain ND [auth ZB] MOL2 format, chain OB [auth YK] MOL2 format, chain OE [auth ZK] MOL2 format, chain PC [auth YT] MOL2 format, chain PF [auth ZT] MOL2 format, chain QD [auth ZC] MOL2 format, chain RB [auth YL] MOL2 format, chain RE [auth ZL] MOL2 format, chain SC [auth YU] MOL2 format, chain SF [auth ZU] MOL2 format, chain TD [auth ZD] MOL2 format, chain UB [auth YM] MOL2 format, chain UE [auth ZM] MOL2 format, chain VC [auth YV] MOL2 format, chain VF [auth ZV] MOL2 format, chain WA [auth YE] MOL2 format, chain WD [auth ZE] MOL2 format, chain XB [auth YN] MOL2 format, chain XE [auth ZN] MOL2 format, chain YC [auth YW] MOL2 format, chain YF [auth ZW] MOL2 format, chain ZA [auth YF] MOL2 format, chain ZD [auth ZF] mmCIF format, chain AC [auth YO] mmCIF format, chain AF [auth ZO] mmCIF format, chain BD [auth YX] mmCIF format, chain BG [auth ZX] mmCIF format, chain CB [auth YG] mmCIF format, chain CE [auth ZG] mmCIF format, chain DC [auth YP] mmCIF format, chain DF [auth ZP] mmCIF format, chain ED [auth YY] mmCIF format, chain EG [auth ZY] mmCIF format, chain FB [auth YH] mmCIF format, chain FE [auth ZH] mmCIF format, chain GC [auth YQ] mmCIF format, chain GF [auth ZQ] mmCIF format, chain HD [auth YZ] mmCIF format, chain HG [auth ZZ] mmCIF format, chain IB [auth YI] mmCIF format, chain IE [auth ZI] mmCIF format, chain JC [auth YR] mmCIF format, chain JF [auth ZR] mmCIF format, chain KD [auth ZA] mmCIF format, chain LB [auth YJ] mmCIF format, chain LE [auth ZJ] mmCIF format, chain MC [auth YS] mmCIF format, chain MF [auth ZS] mmCIF format, chain ND [auth ZB] mmCIF format, chain OB [auth YK] mmCIF format, chain OE [auth ZK] mmCIF format, chain PC [auth YT] mmCIF format, chain PF [auth ZT] mmCIF format, chain QD [auth ZC] mmCIF format, chain RB [auth YL] mmCIF format, chain RE [auth ZL] mmCIF format, chain SC [auth YU] mmCIF format, chain SF [auth ZU] mmCIF format, chain TD [auth ZD] mmCIF format, chain UB [auth YM] mmCIF format, chain UE [auth ZM] mmCIF format, chain VC [auth YV] mmCIF format, chain VF [auth ZV] mmCIF format, chain WA [auth YE] mmCIF format, chain WD [auth ZE] mmCIF format, chain XB [auth YN] mmCIF format, chain XE [auth ZN] mmCIF format, chain YC [auth YW] mmCIF format, chain YF [auth ZW] mmCIF format, chain ZA [auth YF] mmCIF format, chain ZD [auth ZF]	AC [auth YO] AF [auth ZO] BD [auth YX] BG [auth ZX] CB [auth YG] AC [auth YO], AF [auth ZO], BD [auth YX], BG [auth ZX], CB [auth YG], CE [auth ZG], DC [auth YP], DF [auth ZP], ED [auth YY], EG [auth ZY], FB [auth YH], FE [auth ZH], GC [auth YQ], GF [auth ZQ], HD [auth YZ], HG [auth ZZ], IB [auth YI], IE [auth ZI], JC [auth YR], JF [auth ZR], KD [auth ZA], LB [auth YJ], LE [auth ZJ], MC [auth YS], MF [auth ZS], ND [auth ZB], OB [auth YK], OE [auth ZK], PC [auth YT], PF [auth ZT], QD [auth ZC], RB [auth YL], RE [auth ZL], SC [auth YU], SF [auth ZU], TD [auth ZD], UB [auth YM], UE [auth ZM], VC [auth YV], VF [auth ZV], WA [auth YE], WD [auth ZE], XB [auth YN], XE [auth ZN], YC [auth YW], YF [auth ZW], ZA [auth YF], ZD [auth ZF]	NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE C₂₁ H₃₀ N₇ O₁₇ P₃ ACFIXJIJDZMPPO-NNYOXOHSSA-N		Interactions Focus chain AC [auth YO] Focus chain AF [auth ZO] Focus chain BD [auth YX] Focus chain BG [auth ZX] Focus chain CB [auth YG] Focus chain CE [auth ZG] Focus chain DC [auth YP] Focus chain DF [auth ZP] Focus chain ED [auth YY] Focus chain EG [auth ZY] Focus chain FB [auth YH] Focus chain FE [auth ZH] Focus chain GC [auth YQ] Focus chain GF [auth ZQ] Focus chain HD [auth YZ] Focus chain HG [auth ZZ] Focus chain IB [auth YI] Focus chain IE [auth ZI] Focus chain JC [auth YR] Focus chain JF [auth ZR] Focus chain KD [auth ZA] Focus chain LB [auth YJ] Focus chain LE [auth ZJ] Focus chain MC [auth YS] Focus chain MF [auth ZS] Focus chain ND [auth ZB] Focus chain OB [auth YK] Focus chain OE [auth ZK] Focus chain PC [auth YT] Focus chain PF [auth ZT] Focus chain QD [auth ZC] Focus chain RB [auth YL] Focus chain RE [auth ZL] Focus chain SC [auth YU] Focus chain SF [auth ZU] Focus chain TD [auth ZD] Focus chain UB [auth YM] Focus chain UE [auth ZM] Focus chain VC [auth YV] Focus chain VF [auth ZV] Focus chain WA [auth YE] Focus chain WD [auth ZE] Focus chain XB [auth YN] Focus chain XE [auth ZN] Focus chain YC [auth YW] Focus chain YF [auth ZW] Focus chain ZA [auth YF] Focus chain ZD [auth ZF] Interactions & Density Focus chain AC [auth YO] Focus chain AF [auth ZO] Focus chain BD [auth YX] Focus chain BG [auth ZX] Focus chain CB [auth YG] Focus chain CE [auth ZG] Focus chain DC [auth YP] Focus chain DF [auth ZP] Focus chain ED [auth YY] Focus chain EG [auth ZY] Focus chain FB [auth YH] Focus chain FE [auth ZH] Focus chain GC [auth YQ] Focus chain GF [auth ZQ] Focus chain HD [auth YZ] Focus chain HG [auth ZZ] Focus chain IB [auth YI] Focus chain IE [auth ZI] Focus chain JC [auth YR] Focus chain JF [auth ZR] Focus chain KD [auth ZA] Focus chain LB [auth YJ] Focus chain LE [auth ZJ] Focus chain MC [auth YS] Focus chain MF [auth ZS] Focus chain ND [auth ZB] Focus chain OB [auth YK] Focus chain OE [auth ZK] Focus chain PC [auth YT] Focus chain PF [auth ZT] Focus chain QD [auth ZC] Focus chain RB [auth YL] Focus chain RE [auth ZL] Focus chain SC [auth YU] Focus chain SF [auth ZU] Focus chain TD [auth ZD] Focus chain UB [auth YM] Focus chain UE [auth ZM] Focus chain VC [auth YV] Focus chain VF [auth ZV] Focus chain WA [auth YE] Focus chain WD [auth ZE] Focus chain XB [auth YN] Focus chain XE [auth ZN] Focus chain YC [auth YW] Focus chain YF [auth ZW] Focus chain ZA [auth YF] Focus chain ZD [auth ZF]
A1JWG (Subject of Investigation/LOI) Query on A1JWG Download:Ideal Coordinates CCD File SDF format, chain AD [auth YW] SDF format, chain AG [auth ZW] SDF format, chain BB [auth YF] SDF format, chain BE [auth ZF] SDF format, chain CC [auth YO] SDF format, chain CF [auth ZO] SDF format, chain DD [auth YX] SDF format, chain DG [auth ZX] SDF format, chain EB [auth YG] SDF format, chain EE [auth ZG] SDF format, chain FC [auth YP] SDF format, chain FF [auth ZP] SDF format, chain GD [auth YY] SDF format, chain GG [auth ZY] SDF format, chain HB [auth YH] SDF format, chain HE [auth ZH] SDF format, chain IC [auth YQ] SDF format, chain IF [auth ZQ] SDF format, chain JD [auth YZ] SDF format, chain JG [auth ZZ] SDF format, chain KB [auth YI] SDF format, chain KE [auth ZI] SDF format, chain LC [auth YR] SDF format, chain LF [auth ZR] SDF format, chain MD [auth ZA] SDF format, chain NB [auth YJ] SDF format, chain NE [auth ZJ] SDF format, chain OC [auth YS] SDF format, chain OF [auth ZS] SDF format, chain PD [auth ZB] SDF format, chain QB [auth YK] SDF format, chain QE [auth ZK] SDF format, chain RC [auth YT] SDF format, chain RF [auth ZT] SDF format, chain SD [auth ZC] SDF format, chain TB [auth YL] SDF format, chain TE [auth ZL] SDF format, chain UC [auth YU] SDF format, chain UF [auth ZU] SDF format, chain VD [auth ZD] SDF format, chain WB [auth YM] SDF format, chain WE [auth ZM] SDF format, chain XC [auth YV] SDF format, chain XF [auth ZV] SDF format, chain YA [auth YE] SDF format, chain YD [auth ZE] SDF format, chain ZB [auth YN] SDF format, chain ZE [auth ZN] MOL2 format, chain AD [auth YW] MOL2 format, chain AG [auth ZW] MOL2 format, chain BB [auth YF] MOL2 format, chain BE [auth ZF] MOL2 format, chain CC [auth YO] MOL2 format, chain CF [auth ZO] MOL2 format, chain DD [auth YX] MOL2 format, chain DG [auth ZX] MOL2 format, chain EB [auth YG] MOL2 format, chain EE [auth ZG] MOL2 format, chain FC [auth YP] MOL2 format, chain FF [auth ZP] MOL2 format, chain GD [auth YY] MOL2 format, chain GG [auth ZY] MOL2 format, chain HB [auth YH] MOL2 format, chain HE [auth ZH] MOL2 format, chain IC [auth YQ] MOL2 format, chain IF [auth ZQ] MOL2 format, chain JD [auth YZ] MOL2 format, chain JG [auth ZZ] MOL2 format, chain KB [auth YI] MOL2 format, chain KE [auth ZI] MOL2 format, chain LC [auth YR] MOL2 format, chain LF [auth ZR] MOL2 format, chain MD [auth ZA] MOL2 format, chain NB [auth YJ] MOL2 format, chain NE [auth ZJ] MOL2 format, chain OC [auth YS] MOL2 format, chain OF [auth ZS] MOL2 format, chain PD [auth ZB] MOL2 format, chain QB [auth YK] MOL2 format, chain QE [auth ZK] MOL2 format, chain RC [auth YT] MOL2 format, chain RF [auth ZT] MOL2 format, chain SD [auth ZC] MOL2 format, chain TB [auth YL] MOL2 format, chain TE [auth ZL] MOL2 format, chain UC [auth YU] MOL2 format, chain UF [auth ZU] MOL2 format, chain VD [auth ZD] MOL2 format, chain WB [auth YM] MOL2 format, chain WE [auth ZM] MOL2 format, chain XC [auth YV] MOL2 format, chain XF [auth ZV] MOL2 format, chain YA [auth YE] MOL2 format, chain YD [auth ZE] MOL2 format, chain ZB [auth YN] MOL2 format, chain ZE [auth ZN] mmCIF format, chain AD [auth YW] mmCIF format, chain AG [auth ZW] mmCIF format, chain BB [auth YF] mmCIF format, chain BE [auth ZF] mmCIF format, chain CC [auth YO] mmCIF format, chain CF [auth ZO] mmCIF format, chain DD [auth YX] mmCIF format, chain DG [auth ZX] mmCIF format, chain EB [auth YG] mmCIF format, chain EE [auth ZG] mmCIF format, chain FC [auth YP] mmCIF format, chain FF [auth ZP] mmCIF format, chain GD [auth YY] mmCIF format, chain GG [auth ZY] mmCIF format, chain HB [auth YH] mmCIF format, chain HE [auth ZH] mmCIF format, chain IC [auth YQ] mmCIF format, chain IF [auth ZQ] mmCIF format, chain JD [auth YZ] mmCIF format, chain JG [auth ZZ] mmCIF format, chain KB [auth YI] mmCIF format, chain KE [auth ZI] mmCIF format, chain LC [auth YR] mmCIF format, chain LF [auth ZR] mmCIF format, chain MD [auth ZA] mmCIF format, chain NB [auth YJ] mmCIF format, chain NE [auth ZJ] mmCIF format, chain OC [auth YS] mmCIF format, chain OF [auth ZS] mmCIF format, chain PD [auth ZB] mmCIF format, chain QB [auth YK] mmCIF format, chain QE [auth ZK] mmCIF format, chain RC [auth YT] mmCIF format, chain RF [auth ZT] mmCIF format, chain SD [auth ZC] mmCIF format, chain TB [auth YL] mmCIF format, chain TE [auth ZL] mmCIF format, chain UC [auth YU] mmCIF format, chain UF [auth ZU] mmCIF format, chain VD [auth ZD] mmCIF format, chain WB [auth YM] mmCIF format, chain WE [auth ZM] mmCIF format, chain XC [auth YV] mmCIF format, chain XF [auth ZV] mmCIF format, chain YA [auth YE] mmCIF format, chain YD [auth ZE] mmCIF format, chain ZB [auth YN] mmCIF format, chain ZE [auth ZN]	AD [auth YW] AG [auth ZW] BB [auth YF] BE [auth ZF] CC [auth YO] AD [auth YW], AG [auth ZW], BB [auth YF], BE [auth ZF], CC [auth YO], CF [auth ZO], DD [auth YX], DG [auth ZX], EB [auth YG], EE [auth ZG], FC [auth YP], FF [auth ZP], GD [auth YY], GG [auth ZY], HB [auth YH], HE [auth ZH], IC [auth YQ], IF [auth ZQ], JD [auth YZ], JG [auth ZZ], KB [auth YI], KE [auth ZI], LC [auth YR], LF [auth ZR], MD [auth ZA], NB [auth YJ], NE [auth ZJ], OC [auth YS], OF [auth ZS], PD [auth ZB], QB [auth YK], QE [auth ZK], RC [auth YT], RF [auth ZT], SD [auth ZC], TB [auth YL], TE [auth ZL], UC [auth YU], UF [auth ZU], VD [auth ZD], WB [auth YM], WE [auth ZM], XC [auth YV], XF [auth ZV], YA [auth YE], YD [auth ZE], ZB [auth YN], ZE [auth ZN]	Chlorophyllide a C₃₅ H₃₄ Mg N₄ O₅ LRLVQWDKYFMPKX-NYABAGMLSA-L		Interactions Focus chain AD [auth YW] Focus chain AG [auth ZW] Focus chain BB [auth YF] Focus chain BE [auth ZF] Focus chain CC [auth YO] Focus chain CF [auth ZO] Focus chain DD [auth YX] Focus chain DG [auth ZX] Focus chain EB [auth YG] Focus chain EE [auth ZG] Focus chain FC [auth YP] Focus chain FF [auth ZP] Focus chain GD [auth YY] Focus chain GG [auth ZY] Focus chain HB [auth YH] Focus chain HE [auth ZH] Focus chain IC [auth YQ] Focus chain IF [auth ZQ] Focus chain JD [auth YZ] Focus chain JG [auth ZZ] Focus chain KB [auth YI] Focus chain KE [auth ZI] Focus chain LC [auth YR] Focus chain LF [auth ZR] Focus chain MD [auth ZA] Focus chain NB [auth YJ] Focus chain NE [auth ZJ] Focus chain OC [auth YS] Focus chain OF [auth ZS] Focus chain PD [auth ZB] Focus chain QB [auth YK] Focus chain QE [auth ZK] Focus chain RC [auth YT] Focus chain RF [auth ZT] Focus chain SD [auth ZC] Focus chain TB [auth YL] Focus chain TE [auth ZL] Focus chain UC [auth YU] Focus chain UF [auth ZU] Focus chain VD [auth ZD] Focus chain WB [auth YM] Focus chain WE [auth ZM] Focus chain XC [auth YV] Focus chain XF [auth ZV] Focus chain YA [auth YE] Focus chain YD [auth ZE] Focus chain ZB [auth YN] Focus chain ZE [auth ZN] Interactions & Density Focus chain AD [auth YW] Focus chain AG [auth ZW] Focus chain BB [auth YF] Focus chain BE [auth ZF] Focus chain CC [auth YO] Focus chain CF [auth ZO] Focus chain DD [auth YX] Focus chain DG [auth ZX] Focus chain EB [auth YG] Focus chain EE [auth ZG] Focus chain FC [auth YP] Focus chain FF [auth ZP] Focus chain GD [auth YY] Focus chain GG [auth ZY] Focus chain HB [auth YH] Focus chain HE [auth ZH] Focus chain IC [auth YQ] Focus chain IF [auth ZQ] Focus chain JD [auth YZ] Focus chain JG [auth ZZ] Focus chain KB [auth YI] Focus chain KE [auth ZI] Focus chain LC [auth YR] Focus chain LF [auth ZR] Focus chain MD [auth ZA] Focus chain NB [auth YJ] Focus chain NE [auth ZJ] Focus chain OC [auth YS] Focus chain OF [auth ZS] Focus chain PD [auth ZB] Focus chain QB [auth YK] Focus chain QE [auth ZK] Focus chain RC [auth YT] Focus chain RF [auth ZT] Focus chain SD [auth ZC] Focus chain TB [auth YL] Focus chain TE [auth ZL] Focus chain UC [auth YU] Focus chain UF [auth ZU] Focus chain VD [auth ZD] Focus chain WB [auth YM] Focus chain WE [auth ZM] Focus chain XC [auth YV] Focus chain XF [auth ZV] Focus chain YA [auth YE] Focus chain YD [auth ZE] Focus chain ZB [auth YN] Focus chain ZE [auth ZN]

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.20 Å
Aggregation State: HELICAL ARRAY
Reconstruction Method: HELICAL

EM Software:

Task	Software Package	Version
MODEL REFINEMENT	PHENIX	2.0_5885
RECONSTRUCTION	PHENIX

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2026-08-19

Deposition Author(s):

Funding Organization	Location	Grant Number
Polish National Science Centre	Poland	2019/35/D/NZ1/00295

Revision History (Full details and data files)

Version 1.0: 2026-08-19
Type: Initial release

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.