9RVU | pdb_00009rvu

in situ S. pombe hibernating ribosome after 7 days of glucose depletion

PDB DOI: https://doi.org/10.2210/pdb9RVU/pdb
EM Map EMD-54290: EMDB EMDataResource

Classification: RIBOSOME
Organism(s): Schizosaccharomyces pombe
Mutation(s): No

Deposited: 2025-07-09 Released: 2026-04-01
Deposition Author(s): Rosa, H., Gluc, M., Jomaa, A., Mattei, S.
Funding Organization(s): National Science Foundation (NSF, United States), Boehringer Ingelheim Fonds (BIF)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Aggregation State: CELL
Reconstruction Method: SUBTOMOGRAM AVERAGING

Starting Model: experimental
View more details

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

A novel eukaryotic ribosome factor promotes translation restart after dormancy

Gluc, M., Rosa, H., Bozko, M., Prince, C.R., Turner, L.A., Peskova, Y., Feaga, H.A., Gould, K.L., Mattei, S., Jomaa, A.

To be published.

Macromolecule Content

Total Structure Weight: 3,370.7 kDa
Atom Count: 209,623
Modeled Residue Count: 17,579
Deposited Residue Count: 19,207
Unique protein chains: 79
Unique nucleic acid chains: 4

Macromolecules

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Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS2A	B [auth AD]	292	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for Q9Y7L8 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore Q9Y7L8 Go to UniProtKB: Q9Y7L8
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UniProt Group	Q9Y7L8
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Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein eS1B	C [auth AE]	252	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O94438 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O94438 Go to UniProtKB: O94438
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UniProt Group	O94438
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Entity ID: 4
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS5	D [auth AF]	253	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O74892 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O74892 Go to UniProtKB: O74892
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UniProt Group	O74892
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Entity ID: 5
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS3	E [auth AG]	249	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O60128 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O60128 Go to UniProtKB: O60128
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Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	O60128
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Entity ID: 6
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein eS4C	F [auth AH]	262	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for Q9P4W9 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore Q9P4W9 Go to UniProtKB: Q9P4W9
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UniProt Group	Q9P4W9
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Entity ID: 7
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS7A	G [auth AI]	203	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O14277 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O14277 Go to UniProtKB: O14277
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Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	O14277
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Entity ID: 8
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein eS6B	H [auth AJ]	239	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for Q9C0Z7 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore Q9C0Z7 Go to UniProtKB: Q9C0Z7
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Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q9C0Z7
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Entity ID: 9
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein eS7	I [auth AK]	195	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for Q10101 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore Q10101 Go to UniProtKB: Q10101
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UniProt Group	Q10101
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Entity ID: 10
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein eS8B	J [auth AL]	200	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for Q9P7B2 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore Q9P7B2 Go to UniProtKB: Q9P7B2
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Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q9P7B2
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Entity ID: 11
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS4B	K [auth AM]	192	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O59675 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O59675 Go to UniProtKB: O59675
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Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	O59675
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Entity ID: 12
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein eS10B	L [auth AN]	147	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O13614 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O13614 Go to UniProtKB: O13614
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Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	O13614
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Entity ID: 13
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS17A	M [auth AO]	152	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for P0CT73 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P0CT73 Go to UniProtKB: P0CT73
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Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P0CT73
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Entity ID: 14
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein eS12A	N [auth AP]	145	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O14062 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O14062 Go to UniProtKB: O14062
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Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	O14062
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Entity ID: 15
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS15	O [auth AQ]	151	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for P28189 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P28189 Go to UniProtKB: P28189
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Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P28189
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Entity ID: 16
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS11A	P [auth AR]	139	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for P0CT56 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P0CT56 Go to UniProtKB: P0CT56
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Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P0CT56
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Entity ID: 17
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS19B	Q [auth AS]	154	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for Q9UTQ6 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore Q9UTQ6 Go to UniProtKB: Q9UTQ6
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Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q9UTQ6
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Entity ID: 18
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS9A	R [auth AT]	140	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for P0CT64 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P0CT64 Go to UniProtKB: P0CT64
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Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P0CT64
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Entity ID: 19
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein eS17A	S [auth AU]	131	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O42984 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O42984 Go to UniProtKB: O42984
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Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	O42984
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Entity ID: 20
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS13A	T [auth AV]	152	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for P0CT66 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P0CT66 Go to UniProtKB: P0CT66
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UniProt Group	P0CT66
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Entity ID: 21
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein eS19A	U [auth AW]	144	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for P58234 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P58234 Go to UniProtKB: P58234
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UniProt Group	P58234
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Entity ID: 22
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS10	V [auth Aa]	118	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O74893 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O74893 Go to UniProtKB: O74893
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Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	O74893
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Entity ID: 23
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein eS21	W [auth Ab]	87	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for P05764 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P05764 Go to UniProtKB: P05764
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Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P05764
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Entity ID: 24
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS8A	X [auth Ac]	130	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for P0CT58 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P0CT58 Go to UniProtKB: P0CT58
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Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P0CT58
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Entity ID: 25
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS12A	Y [auth Ad]	143	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for P0CT75 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P0CT75 Go to UniProtKB: P0CT75
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Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P0CT75
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Entity ID: 26
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein eS24A	Z [auth Ae]	134	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O13784 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O13784 Go to UniProtKB: O13784
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Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	O13784
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Entity ID: 27
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein eS25A	AA [auth Af]	89	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for P79009 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P79009 Go to UniProtKB: P79009
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Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P79009
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Entity ID: 28
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein eS26B	BA [auth Ag]	119	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for Q9UTG4 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore Q9UTG4 Go to UniProtKB: Q9UTG4
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UniProt Group	Q9UTG4
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Entity ID: 29
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein eS27	CA [auth Ah]	83	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O74330 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O74330 Go to UniProtKB: O74330
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UniProt Group	O74330
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Entity ID: 30
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein eS28A	DA [auth Ai]	68	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for P0CT79 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P0CT79 Go to UniProtKB: P0CT79
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UniProt Group	P0CT79
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Entity ID: 31
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS14	EA [auth Aj]	56	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O74329 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O74329 Go to UniProtKB: O74329
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UniProt Group	O74329
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Entity ID: 32
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein eS30A	FA [auth Ak]	61	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for P0CT62 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P0CT62 Go to UniProtKB: P0CT62
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UniProt Group	P0CT62
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Entity ID: 33
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein RACK1	GA [auth Am]	314	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for Q10281 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore Q10281 Go to UniProtKB: Q10281
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UniProt Group	Q10281
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Entity ID: 34
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein eL42	HA [auth B0]	106	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for Q9UTI8 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore Q9UTI8 Go to UniProtKB: Q9UTI8
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UniProt Group	Q9UTI8
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Entity ID: 35
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein eL43A	IA [auth B1]	94	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for Q9HGL8 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore Q9HGL8 Go to UniProtKB: Q9HGL8
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UniProt Group	Q9HGL8
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Entity ID: 39
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein uL2A	MA [auth BN]	253	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for P0CT70 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P0CT70 Go to UniProtKB: P0CT70
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UniProt Group	P0CT70
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Entity ID: 40
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein uL3A	NA [auth BO]	388	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for P40372 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P40372 Go to UniProtKB: P40372
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UniProt Group	P40372
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Entity ID: 41
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein uL4A	OA [auth BP]	363	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for P35679 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P35679 Go to UniProtKB: P35679
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UniProt Group	P35679
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Entity ID: 42
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein uL18B	PA [auth BQ]	294	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O74306 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O74306 Go to UniProtKB: O74306
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Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	O74306
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Entity ID: 43
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein eL6	QA [auth BR]	195	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for P79071 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P79071 Go to UniProtKB: P79071
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UniProt Group	P79071
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Entity ID: 44
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein uL30C	RA [auth BS]	251	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O60143 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O60143 Go to UniProtKB: O60143
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Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	O60143
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Entity ID: 45
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein eL8	SA [auth BT]	259	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O13672 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O13672 Go to UniProtKB: O13672
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UniProt Group	O13672
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Entity ID: 46
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein uL16A	TA [auth BV]	221	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for Q09127 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore Q09127 Go to UniProtKB: Q09127
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UniProt Group	Q09127
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Entity ID: 47
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein uL5A	UA [auth BW]	174	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for P0CT77 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P0CT77 Go to UniProtKB: P0CT77
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UniProt Group	P0CT77
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Entity ID: 48
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein eL13	VA [auth BX]	208	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O74175 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O74175 Go to UniProtKB: O74175
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UniProt Group	O74175
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Entity ID: 49
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein eL14	WA [auth BY]	134	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O94238 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O94238 Go to UniProtKB: O94238
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UniProt Group	O94238
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Entity ID: 50
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein eL15B	XA [auth BZ]	201	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for Q9US22 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore Q9US22 Go to UniProtKB: Q9US22
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UniProt Group	Q9US22
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Entity ID: 51
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein uL13A	YA [auth Ba]	197	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O42848 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O42848 Go to UniProtKB: O42848
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UniProt Group	O42848
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Entity ID: 52
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein eL18B	ZA [auth Bc]	187	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for Q8TFH1 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore Q8TFH1 Go to UniProtKB: Q8TFH1
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UniProt Group	Q8TFH1
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Entity ID: 53
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein eL19B	AB [auth Bd]	193	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O42699 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O42699 Go to UniProtKB: O42699
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UniProt Group	O42699
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Entity ID: 54
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein eL20A	BB [auth Be]	176	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for P0CT68 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P0CT68 Go to UniProtKB: P0CT68
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UniProt Group	P0CT68
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Entity ID: 55
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein eL21B	CB [auth Bf]	160	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O42706 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O42706 Go to UniProtKB: O42706
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UniProt Group	O42706
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Entity ID: 56
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein eL22	DB [auth Bg]	117	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for Q09668 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore Q09668 Go to UniProtKB: Q09668
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UniProt Group	Q09668
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Entity ID: 57
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein uL14A	EB [auth Bh]	139	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for P0CT60 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P0CT60 Go to UniProtKB: P0CT60
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UniProt Group	P0CT60
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Entity ID: 58
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein eL24B	FB [auth Bi]	149	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O74884 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O74884 Go to UniProtKB: O74884
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UniProt Group	O74884
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Entity ID: 59
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein uL23A	GB [auth Bj]	141	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for Q10330 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore Q10330 Go to UniProtKB: Q10330
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UniProt Group	Q10330
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Entity ID: 60
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein uL24	HB [auth Bk]	126	Schizosaccharomyces pombe	Mutation(s): 0
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Find proteins for P78946 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P78946 Go to UniProtKB: P78946
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UniProt Group	P78946
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Entity ID: 61
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein eL27A	IB [auth Bl]	136	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O14388 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O14388 Go to UniProtKB: O14388
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UniProt Group	O14388
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Entity ID: 62
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein uL15B	JB [auth Bm]	148	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for P57728 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P57728 Go to UniProtKB: P57728
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UniProt Group	P57728
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Entity ID: 63
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein eL29	KB [auth Bn]	61	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for Q92366 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore Q92366 Go to UniProtKB: Q92366
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UniProt Group	Q92366
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Entity ID: 64
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein eL30A	LB [auth Bo]	109	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for P52808 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P52808 Go to UniProtKB: P52808
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UniProt Group	P52808
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Entity ID: 65
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein eL31	MB [auth Bp]	113	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for Q9URX6 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore Q9URX6 Go to UniProtKB: Q9URX6
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UniProt Group	Q9URX6
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Entity ID: 66
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein eL32A	NB [auth Bq]	127	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for P79015 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P79015 Go to UniProtKB: P79015
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UniProt Group	P79015
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Entity ID: 67
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein eL33A	OB [auth Br]	108	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for Q9USX4 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore Q9USX4 Go to UniProtKB: Q9USX4
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UniProt Group	Q9USX4
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Entity ID: 68
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein eL34B	PB [auth Bs]	111	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for Q9URT8 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore Q9URT8 Go to UniProtKB: Q9URT8
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UniProt Group	Q9URT8
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Entity ID: 69
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein uL29	QB [auth Bt]	122	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O74904 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O74904 Go to UniProtKB: O74904
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UniProt Group	O74904
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Entity ID: 70
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein eL36B	RB [auth Bu]	99	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O94658 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O94658 Go to UniProtKB: O94658
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UniProt Group	O94658
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Entity ID: 71
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein eL37B	SB [auth Bv]	91	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for P05733 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P05733 Go to UniProtKB: P05733
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UniProt Group	P05733
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Entity ID: 72
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein eL38A	TB [auth Bw]	74	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for Q9USR7 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore Q9USR7 Go to UniProtKB: Q9USR7
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UniProt Group	Q9USR7
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Entity ID: 73
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein eL39	UB [auth Bx]	51	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for P05767 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P05767 Go to UniProtKB: P05767
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UniProt Group	P05767
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Entity ID: 74
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein eL28	VB [auth By]	134	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O14069 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O14069 Go to UniProtKB: O14069
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UniProt Group	O14069
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Entity ID: 75
Molecule	Chains	Sequence Length	Organism	Details	Image
Ribosome-associated protein oga1	WB [auth H1]	284	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O42914 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O42914 Go to UniProtKB: O42914
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UniProt Group	O42914
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Entity ID: 76
Molecule	Chains	Sequence Length	Organism	Details	Image
Elongation factor 2	XB [auth HE]	842	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O14460 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O14460 Go to UniProtKB: O14460
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UniProt Group	O14460
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Entity ID: 77
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein uL1B	YB [auth HL]	216	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O74836 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O74836 Go to UniProtKB: O74836
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UniProt Group	O74836
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Entity ID: 78
Molecule	Chains	Sequence Length	Organism	Details	Image
SDO1-like protein C21C3.19	ZB [auth HS]	106	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for Q9P7K6 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore Q9P7K6 Go to UniProtKB: Q9P7K6
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UniProt Group	Q9P7K6
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Entity ID: 79
Molecule	Chains	Sequence Length	Organism	Details	Image
Eukaryotic translation initiation factor 5A-1	AC [auth HI]	157	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for P56289 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P56289 Go to UniProtKB: P56289
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UniProt Group	P56289
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Entity ID: 80
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein eL40A	BC [auth BA]	51	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for P0CH06 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P0CH06 Go to UniProtKB: P0CH06
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UniProt Group	P0CH06
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Entity ID: 81
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein uL6B	CC [auth BU]	189	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O74905 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O74905 Go to UniProtKB: O74905
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UniProt Group	O74905
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Entity ID: 82
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein uL22A	DC [auth Bb]	187	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O14339 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O14339 Go to UniProtKB: O14339
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UniProt Group	O14339
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Entity ID: 83
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein uL22A	EC [auth A]	20	Schizosaccharomyces pombe	Mutation(s): 0
UniProt
Find proteins for O14339 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O14339 Go to UniProtKB: O14339
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UniProt Group	O14339
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Entity ID: 1
Molecule	Chains	Length	Organism	Image
18S small subunit ribosomal RNA	A [auth AA]	1,842	Schizosaccharomyces pombe
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Entity ID: 36
Molecule	Chains	Length	Organism	Image
28S large subunit ribosomal RNA	JA [auth B2]	3,498	Schizosaccharomyces pombe
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Entity ID: 37
Molecule	Chains	Length	Organism	Image
5S large subunit ribosomal RNA	KA [auth B3]	246	Schizosaccharomyces pombe
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Entity ID: 38
Molecule	Chains	Length	Organism	Image
5.8S large subunit ribosomal RNA	LA [auth B4]	165	Schizosaccharomyces pombe
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Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
ZN Query on ZN Download Ideal Coordinates CCD File SDF format, chain FC [auth Ag] SDF format, chain GC [auth Ah] SDF format, chain HC [auth Aj] SDF format, chain IC [auth B0] SDF format, chain JC [auth B1] SDF format, chain KC [auth Bv] MOL2 format, chain FC [auth Ag] MOL2 format, chain GC [auth Ah] MOL2 format, chain HC [auth Aj] MOL2 format, chain IC [auth B0] MOL2 format, chain JC [auth B1] MOL2 format, chain KC [auth Bv] mmCIF format, chain FC [auth Ag] mmCIF format, chain GC [auth Ah] mmCIF format, chain HC [auth Aj] mmCIF format, chain IC [auth B0] mmCIF format, chain JC [auth B1] mmCIF format, chain KC [auth Bv]	FC [auth Ag] GC [auth Ah] HC [auth Aj] IC [auth B0] JC [auth B1] FC [auth Ag], GC [auth Ah], HC [auth Aj], IC [auth B0], JC [auth B1], KC [auth Bv]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Interactions Focus chain FC [auth Ag] Focus chain GC [auth Ah] Focus chain HC [auth Aj] Focus chain IC [auth B0] Focus chain JC [auth B1] Focus chain KC [auth Bv] Interactions & Density Focus chain FC [auth Ag] Focus chain GC [auth Ah] Focus chain HC [auth Aj] Focus chain IC [auth B0] Focus chain JC [auth B1] Focus chain KC [auth Bv]

Modified Residues 1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
5CT Query on 5CT	AC [auth HI]	PEPTIDE LINKING	C₁₀ H₂₃ N₃ O₃		LYS

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Aggregation State: CELL
Reconstruction Method: SUBTOMOGRAM AVERAGING

EM Software:

Task	Software Package	Version
MODEL REFINEMENT	PHENIX	1.21.2_5419
RECONSTRUCTION	Warp	2.0.0dev36

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2026-04-01

Deposition Author(s):

Funding Organization	Location	Grant Number
National Science Foundation (NSF, United States)	United States	--
Boehringer Ingelheim Fonds (BIF)	Germany	--

Revision History (Full details and data files)

Version 1.0: 2026-04-01
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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.id_divider{ color: #ccc; padding: 0 10px 0 10px; } .extended_id_info{ color: #ccc; font-size: 18px; position: relative; top: -10px; left: 4px; } 9RVU | pdb_00009rvu

in situ S. pombe hibernating ribosome after 7 days of glucose depletion

A novel eukaryotic ribosome factor promotes translation restart after dormancy

Entity ID: 2

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Entity ID: 3

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Entity ID: 7

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Entity ID: 8

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Entity ID: 9

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Entity ID: 11

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Entity ID: 12

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Entity ID: 13

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Entity ID: 14

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Entity ID: 15

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Entity ID: 16

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Entity ID: 17

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Entity ID: 18

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Entity ID: 20

9RVU | pdb_00009rvu