9GDW | pdb_00009gdw

RNA binding domain of Turnip crinkle virus p38, p38R

• PDB DOI: https://doi.org/10.2210/pdb9GDW/pdb
• BMRB: 34946

• Classification: RNA BINDING PROTEIN
• Organism(s): Turnip crinkle virus
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2024-08-06 Released: 2025-08-20 
• Deposition Author(s): Weininger, U., Golbik, R., Thondorf, I., Behrens, S.E.
• Funding Organization(s): Not funded

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 20 
• Conformers Submitted: 10 
• Selection Criteria: structures with the lowest energy 

Literature

RNA binding domain of Turnip crinkle virus p38, p38R

Weininger, U., Golbik, R., Thondorf, I., Behrens, S.E.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by (software)

Biological Assembly Evidence: NMR Distance Restraints

Macromolecule Content 

• Total Structure Weight: 5.19 kDa 
• Atom Count: 364 
• Modeled Residue Count: 45 
• Deposited Residue Count: 45 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Capsid protein	A	45	Turnip crinkle virus	Mutation(s): 0  Gene Names: ORF4
UniProt
Find proteins for P06663 (Turnip crinkle virus) Explore P06663  Go to UniProtKB:  P06663

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 20 
• Conformers Submitted: 10 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History 

& Funding Information

Deposition Data

• Released Date: 2025-08-20 
Deposition Author(s): Weininger, U., Golbik, R., Thondorf, I., Behrens, S.E.

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Funding Organization	Location	Grant Number
Not funded		--

Revision History  

• Version 1.0: 2025-08-20
  Type: Initial release