Crystal Structure of Human DAPK1 Catalytic Subunit Complexed with Compound SRM-07-081a
Minasov, G., Winsor, J., Roy, S.M., Watterson, D.M., Shuvalova, L.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Death-associated protein kinase 1 | 294 | Homo sapiens | Mutation(s): 0  Gene Names: DAPK1, DAPK EC: 2.7.11.1 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P53355 (Homo sapiens) Explore P53355  Go to UniProtKB:  P53355 | |||||
PHAROS:  P53355 GTEx:  ENSG00000196730  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P53355 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
A1BB6 (Subject of Investigation/LOI) Query on A1BB6 | B [auth A] | 3-chloro-6-(4-methylpiperazin-1-yl)-4-(pyridin-4-yl)pyridazine C14 H16 Cl N5 GEGHOUWQCHWMKH-UHFFFAOYSA-N | |||
SO4 Query on SO4 | D [auth A], E [auth A], F [auth A], G [auth A], H [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
BO3 Query on BO3 | C [auth A] | BORIC ACID B H3 O3 KGBXLFKZBHKPEV-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 47.01 | α = 90 |
b = 62.684 | β = 90 |
c = 88.462 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
HKL-3000 | data reduction |
HKL-3000 | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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National Institutes of Health/National Institute on Aging (NIH/NIA) | United States | AG066722 |