9ATW

Structure of biofilm-forming functional amyloid PSMa1 from Staphylococcus aureus


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.50 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: HELICAL 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Structure of biofilm-forming functional amyloid PSM alpha 1 from Staphylococcus aureus.

Hansen, K.H.Byeon, C.H.Liu, Q.Drace, T.Boesen, T.Conway, J.F.Andreasen, M.Akbey, U.

(2024) Proc Natl Acad Sci U S A 121: e2406775121-e2406775121

  • DOI: https://doi.org/10.1073/pnas.2406775121
  • Primary Citation of Related Structures:  
    9ATW

  • PubMed Abstract: 

    Biofilm-protected pathogenic Staphylococcus aureus causes chronic infections that are difficult to treat. An essential building block of these biofilms are functional amyloid fibrils that assemble from phenol-soluble modulins (PSMs). PSMα1 cross-seeds other PSMs into cross-β amyloid folds and is therefore a key element in initiating biofilm formation. However, the paucity of high-resolution structures hinders efforts to prevent amyloid assembly and biofilm formation. Here, we present a 3.5 Å resolution density map of the major PSMα1 fibril form revealing a left-handed cross-β fibril composed of two C 2 -symmetric U-shaped protofilaments whose subunits are unusually tilted out-of-plane. Monomeric α-helical PSMα1 is extremely cytotoxic to cells, despite the moderate toxicity of the cross-β fibril. We suggest mechanistic insights into the PSM functional amyloid formation and conformation transformation on the path from monomer-to-fibril formation. Details of PSMα1 assembly and fibril polymorphism suggest how S. aureus utilizes functional amyloids to form biofilms and establish a framework for developing therapeutics against infection and antimicrobial resistance.


  • Organizational Affiliation

    Department of Structural Biology, School of Medicine, University of Pittsburgh, Pittsburgh, PA 15261.


Macromolecules

Find similar proteins by:  Sequence   |   3D Structure  

Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Phenol-soluble modulin alpha 1 peptide21Staphylococcus aureusMutation(s): 0 
UniProt
Find proteins for P0C7Y1 (Staphylococcus aureus (strain NCTC 8325 / PS 47))
Explore P0C7Y1 
Go to UniProtKB:  P0C7Y1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP0C7Y1
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.50 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: HELICAL 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONcryoSPARC4.1
MODEL REFINEMENTPHENIX1.20

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Not funded--

Revision History  (Full details and data files)

  • Version 1.0: 2024-08-07
    Type: Initial release
  • Version 1.1: 2024-08-14
    Changes: Data collection, Derived calculations
  • Version 1.2: 2024-08-21
    Changes: Data collection, Database references