9UOZ | pdb_00009uoz

Structure of Echinococcus multilocularis Cystatin B

PDB DOI: https://doi.org/10.2210/pdb9UOZ/pdb
Entry: 9UOZ supersedes: 8JOH

Classification: HYDROLASE
Organism(s): Echinococcus multilocularis
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2025-04-27 Released: 2025-08-20
Deposition Author(s): Huang, S.Q., Hong, W.B.
Funding Organization(s): National Natural Science Foundation of China (NSFC)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.00 Å
R-Value Free:
0.240 (Depositor), 0.243 (DCC)
R-Value Work:
0.211 (Depositor), 0.216 (DCC)

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

Validation slider image for 9UOZ

This is version 1.0 of the entry. See complete history.

Literature

Crystal Structure of Echinococcus multilocularis Cystatin B

Huang, S.Q., Hong, W.B.

To be published.

Macromolecule Content

Total Structure Weight: 95.99 kDa
Atom Count: 6,647
Modeled Residue Count: 798
Deposited Residue Count: 848
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Cystatin B Stefin B	A B C [auth D] D [auth F] E [auth C] A, B, C [auth D], D [auth F], E [auth C], F [auth E], G, H	106	Echinococcus multilocularis	Mutation(s): 0 Gene Names: EmuJ_000159200
UniProt
Find proteins for A0A087VZV0 (Echinococcus multilocularis) Explore A0A087VZV0 Go to UniProtKB: A0A087VZV0
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	A0A087VZV0
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.00 Å
R-Value Free: 0.240 (Depositor), 0.243 (DCC)
R-Value Work: 0.211 (Depositor), 0.216 (DCC)

Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 72.773	α = 90
b = 66.112	β = 103.432
c = 92.6	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
XDS	data reduction
XDS	data scaling
PHASER	phasing

Structure Validation

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Entry History

& Funding Information

Deposition Data

Released Date: 2025-08-20

Deposition Author(s):

This entry supersedes: 8JOH

Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	--

Revision History (Full details and data files)

Version 1.0: 2025-08-20
Type: Initial release

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.