9UJO | pdb_00009ujo

Solution structure of MeV Vc 221-299


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: target function 

wwPDB Validation 3D Report Full Report

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Literature

Solution structure of the C-terminal domain of the measles virus V protein in its free form and mechanistic analysis of STAT2 targeting.

Morita, K.Goda, N.Kimoto, M.Inaba-Inoue, S.Yabuno, N.Sugiyama, A.Kumeta, H.Ose, T.

(2025) J Virol 99: e0073925-e0073925

  • DOI: https://doi.org/10.1128/jvi.00739-25
  • Primary Citation Related Structures: 
    9UJO

  • PubMed Abstract: 

    Viruses commonly evade the host antiviral interferon (IFN) response by targeting key components of the Janus kinase-signal transducer and activator of transcription (JAK-STAT) pathway, typically STAT1 and STAT2. Among the well-characterized viral IFN antagonists, measles virus (MeV), a member of the Morbillivirus genus, encodes a multifunctional V protein (MeV-V) that directly interacts with STAT proteins. The C-terminal domain (CTD) of MeV-V selectively binds to STAT2, disrupting the formation of the IFN-stimulated gene factor 3 (ISGF3) complex by inhibiting the STAT2-interferon regulatory factor 9 (IRF9) association. Here, we report a solution structure covering the MeV-V CTD in its unbound form, as determined by nuclear magnetic resonance spectroscopy. While the overall architecture, including a distinctive zinc-finger motif, conforms to previously predicted features, our analysis reveals unexpected features, including distinct proline cis conformers that may have functional relevance. Molecular mapping analysis, combined with relaxation measurements, identified key residues implicated in STAT2 recognition and revealed substantial conformational flexibility within the domain. These findings suggest that MeV-V CTD employs a shared binding surface for STAT2 binding as for melanoma differentiation-associated protein 5 (MDA5) interaction, underscoring its structural adaptability. As V proteins across Morbillivirus species engage diverse host pathways, including immune signaling, cell cycle regulation, and apoptosis, by targeting multiple proteins, we propose that the dynamic yet folded nature of the V CTD underlies its ability to serve as a versatile interaction module in host-pathogen interplay.IMPORTANCEThe measles virus V protein, encoded by the P gene, orchestrates the broad modulation of host responses, including immune evasion, by interacting with multiple host factors. With regard to structural studies of V CTD , to date, only one protein from parainfluenza virus 5 has been crystallographically analyzed in complex with host targets. Despite the conserved nature of the V CTD among paramyxoviruses, structural information on the unbound state of this domain is lacking, and current insights largely rely on computational predictions based on the structure of the bound form. Our nuclear magnetic resonance work provides the first structure of the V CTD from paramyxoviruses in its free form. In accordance with our previously presented data, we further confirmed that the MeV-V binding site of STAT2 overlaps that of IRF9. The conformational flexibility observed within the folded CTD provides the structural basis for its ability to engage with multiple host targets with high specificity.


  • Organizational Affiliation
    • Faculty of Advanced Life Science, Hokkaido University, Sapporo, Japan.

Macromolecule Content 

  • Total Structure Weight: 9.38 kDa 
  • Atom Count: 644 
  • Modeled Residue Count: 81 
  • Deposited Residue Count: 81 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Non-structural protein V81Measles morbillivirusMutation(s): 0 
Gene Names: P
UniProt
Find proteins for P0C774 (Measles virus (strain Ichinose-B95a))
Explore P0C774 
Go to UniProtKB:  P0C774
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP0C774
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: target function 

Structure Validation

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Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Japan Society for the Promotion of Science (JSPS)Japan24K01959

Revision History  (Full details and data files)

  • Version 1.0: 2025-09-03
    Type: Initial release
  • Version 1.1: 2026-07-15
    Changes: Database references