Cryo-EM and single molecule visualization unravel the role of human condensin II activation by M18BP1 in driving DNA compaction
Borsellini, A., Vannini, A.To be published.
Experimental Data Snapshot
wwPDB Validation 3D Report Full Report
Macromolecule Content 
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Structural maintenance of chromosomes protein 2 | 1,197 | Homo sapiens | Mutation(s): 0  Gene Names: SMC2, CAPE, SMC2L1, PRO0324 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
PHAROS:  O95347 GTEx:  ENSG00000136824  | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O95347 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Structural maintenance of chromosomes protein 4 | 1,288 | Homo sapiens | Mutation(s): 0  Gene Names: SMC4, CAPC, SMC4L1 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
PHAROS:  Q9NTJ3 GTEx:  ENSG00000113810  | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9NTJ3 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 3 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Condensin-2 complex subunit D3 | C [auth D] | 1,498 | Homo sapiens | Mutation(s): 0  Gene Names: NCAPD3, CAPD3, KIAA0056 | ![]() |
UniProt & NIH Common Fund Data Resources | |||||
PHAROS:  P42695 GTEx:  ENSG00000151503  | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P42695 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 4 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Condensin-2 complex subunit H2 | D [auth H] | 605 | Homo sapiens | Mutation(s): 0  Gene Names: NCAPH2, CAPH2 | ![]() |
UniProt & NIH Common Fund Data Resources | |||||
PHAROS:  Q6IBW4 GTEx:  ENSG00000025770  | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q6IBW4 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 5 | ||||
| Molecule | Chains | Length | Organism | Image |
|---|---|---|---|---|
| DNA (primer) | E [auth P] | 42 | DNA molecule | ![]() |
Sequence AnnotationsExpand | ||||
Reference Sequence | ||||
Entity ID: 6 | ||||
| Molecule | Chains | Length | Organism | Image |
|---|---|---|---|---|
| DNA (template) | F [auth T] | 42 | DNA molecule | ![]() |
Sequence AnnotationsExpand | ||||
Reference Sequence | ||||
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ADP Download:Ideal Coordinates CCD File | G [auth A], H [auth B] | ADENOSINE-5'-DIPHOSPHATE C10 H15 N5 O10 P2 XTWYTFMLZFPYCI-KQYNXXCUSA-N | |||
| BEF Download:Ideal Coordinates CCD File | I [auth B] | BERYLLIUM TRIFLUORIDE ION Be F3 OGIAHMCCNXDTIE-UHFFFAOYSA-K | |||
| Task | Software Package | Version |
|---|---|---|
| RECONSTRUCTION | RELION |
| Funding Organization | Location | Grant Number |
|---|---|---|
| Other private | -- |