9TPL | pdb_00009tpl

Human Cardiac Interacting Heads Motif, Conformation A


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.60 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

Validation slider image for 9TPL

This is version 1.0 of the entry. See complete history

Literature

Dynamics of the beta-cardiac myosin auto-inhibited state explain cardiomyopathy pathogenesis.

Auguin, D.Lannes, L.Kikuti, C.Ayoub, N.Juille, M.Rety, S.Nandwani, N.Pathak, D.Ruppel, K.M.Spudich, J.A.Robert-Paganin, J.Houdusse, A.

(2026) Nat Commun 

  • DOI: https://doi.org/10.1038/s41467-026-73572-5
  • Primary Citation Related Structures: 
    9TPJ, 9TPK, 9TPL

  • PubMed Abstract: 

    Cardiac contractility requires precise regulation. A recently discovered form of regulation of cardiac contractility involves a β-cardiac myosin off-state, the Interacting-Heads Motif ( Car IHM). Despite its central role in cardiac physiology and disease, Car IHM structural dynamics remain poorly understood. Here, we integrate near-atomic resolution cryo-EM with all-atom molecular dynamics to characterize Car IHM in solution and in the context of the filament. We describe its conformational ensembles maintained by dynamic interfaces, and the stabilizing effect of the dilated cardiomyopathy mutation E525K, which limits S2 coiled-coil flexibility and impairs myosin activation. Intrinsically disordered regions of Car IHM and MyBP-C further modulate these dynamics. Our findings provide evidence for how Car IHM ensembles balance off/on states and anchor myosin heads in distinct thick filament environments. This integrated structural and dynamic approach enhances the understanding of thick filament regulation and facilitates predictions of the effects of genetic variants in inherited cardiomyopathies.


  • Organizational Affiliation
    • Structural Motility, CNRS UMR144, Institut Curie, Sorbonne Université, Université Paris Sciences et Lettres, Paris, France.

Macromolecule Content 

  • Total Structure Weight: 529.7 kDa 
  • Atom Count: 19,247 
  • Modeled Residue Count: 2,376 
  • Deposited Residue Count: 4,592 
  • Unique protein chains: 3

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Myosin-7
A, B
1,935Homo sapiensMutation(s): 0 
Gene Names: MYH7MYHCB
UniProt & NIH Common Fund Data Resources
Find proteins for P12883 (Homo sapiens)
Explore P12883 
Go to UniProtKB:  P12883
PHAROS:  P12883
GTEx:  ENSG00000092054 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP12883
Sequence Annotations
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Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 2
MoleculeChains  Sequence LengthOrganismDetailsImage
Myosin light chain 3
C, D
195Homo sapiensMutation(s): 0 
Gene Names: MYL3
UniProt & NIH Common Fund Data Resources
Find proteins for P08590 (Homo sapiens)
Explore P08590 
Go to UniProtKB:  P08590
PHAROS:  P08590
GTEx:  ENSG00000160808 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP08590
Sequence Annotations
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Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 3
MoleculeChains  Sequence LengthOrganismDetailsImage
Myosin regulatory light chain 2, ventricular/cardiac muscle isoform
E, F
166Homo sapiensMutation(s): 0 
Gene Names: MYL2MLC2
UniProt & NIH Common Fund Data Resources
Find proteins for P10916 (Homo sapiens)
Explore P10916 
Go to UniProtKB:  P10916
PHAROS:  P10916
GTEx:  ENSG00000111245 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP10916
Sequence Annotations
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Reference Sequence

Small Molecules

Modified Residues  1 Unique
IDChains TypeFormula2D DiagramParent
M3L
Query on M3L
A, B
L-PEPTIDE LINKINGC9 H21 N2 O2LYS

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.60 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX1.19.2_4158
RECONSTRUCTIONcryoSPARC

Structure Validation

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Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Heart, Lung, and Blood Institute (NIH/NHLBI)United StatesRM1GM131981-01
Agence Nationale de la Recherche (ANR)FranceANR-21-CE11-0022-01
National Institutes of Health/National Heart, Lung, and Blood Institute (NIH/NHLBI)United StatesR01GM33289

Revision History  (Full details and data files)

  • Version 1.0: 2026-06-17
    Type: Initial release