9SLW | pdb_00009slw

holo human GSTA1

PDB DOI: https://doi.org/10.2210/pdb9SLW/pdb

Classification: TRANSFERASE
Organism(s): Homo sapiens
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2025-09-05 Released: 2026-09-30
Deposition Author(s): Ndikoum-Matip, G., Nahoum, V., Maveyraud, L.
Funding Organization(s): Agence Nationale de la Recherche (ANR)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.47 Å
R-Value Free:
0.197 (Depositor), 0.190 (DCC)
R-Value Work:
0.181 (Depositor), 0.173 (DCC)
R-Value Observed:
0.182 (Depositor)

Starting Model: experimental
View more details

wwPDB Validation 3D Report Full Report

Validation slider image for 9SLW

Ligand Structure Quality Assessment

This is version 1.0 of the entry. See complete history.

Literature

The tumor-suppressor cholesterol metabolite dendrogenin A is produced by glutathione transferase A1-1

Ayadi, S., de Medina, P., Lacroix-Triki, M., Bunay, J., Voisin, M., Pucheu, L., Sjodin, B., Gadaleta, E., Chelala, C., Kim, H.Y.H., Franchet, C., Allal, B., Filleron, T., le Faouder, P., Mourey, L., Vija, L., Porter, N.A., Mannervik, B., Nahoum, V., Maveyraud, L., Silvente-Poirot, S., Poirot, M.

To be published.

Macromolecule Content

Total Structure Weight: 51.95 kDa
Atom Count: 4,203
Modeled Residue Count: 439
Deposited Residue Count: 444
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Glutathione S-transferase A1	A, B	222	Homo sapiens	Mutation(s): 0 Gene Names: GSTA1 EC: 2.5.1.18 (PDB Primary Data), 1.11.1 (PDB Primary Data), 5.3.3 (PDB Primary Data)
UniProt & NIH Common Fund Data Resources
Find proteins for P08263 (Homo sapiens) Explore P08263 Go to UniProtKB: P08263
PHAROS: P08263 GTEx: ENSG00000243955
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P08263
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
GSH (Subject of Investigation/LOI) Query on GSH Download:Ideal Coordinates CCD File SDF format, chain D [auth B] SDF format, chain C [auth A] MOL2 format, chain D [auth B] MOL2 format, chain C [auth A] mmCIF format, chain D [auth B] mmCIF format, chain C [auth A]	C [auth A], D [auth B]	Glutathione C₁₀ H₁₇ N₃ O₆ S RWSXRVCMGQZWBV-WDSKDSINSA-N		Interactions Focus chain C [auth A] Focus chain D [auth B] Interactions & Density Focus chain C [auth A] Focus chain D [auth B]

Biologically Interesting Molecules (External Reference)

1 Unique

Entity ID: 2
ID	Chains	Name	Type/Class	2D Diagram	3D Interactions
PRD_002593 (GSH) Query on PRD_002593	C [auth A], D [auth B]	Glutathione	Peptide-like / Oxidation-reduction		Interactions Focus chain C [auth A] Focus chain D [auth B] Interactions & Density Focus chain C [auth A] Focus chain D [auth B]

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.47 Å
R-Value Free: 0.197 (Depositor), 0.190 (DCC)
R-Value Work: 0.181 (Depositor), 0.173 (DCC)
R-Value Observed: 0.182 (Depositor)

Space Group: C 1 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 99.49	α = 90
b = 93.16	β = 93.44
c = 51.25	γ = 90

Software Package:

Software Name	Purpose
BUSTER	refinement
autoPROC	data processing
XSCALE	data scaling
TRUNCATE	data processing
XDS	data reduction
BUSTER	phasing

Structure Validation

View Full Validation Report

Ligand Structure Quality Assessment

View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2026-09-30

Deposition Author(s):

Ndikoum-Matip, G.

Funding Organization	Location	Grant Number
Agence Nationale de la Recherche (ANR)	France	ANR-20-CE11-0005

Revision History (Full details and data files)

Version 1.0: 2026-09-30
Type: Initial release