9RB6 | pdb_00009rb6

A53T alpha-synuclein fibril - Type 2


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.02 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: HELICAL 

wwPDB Validation 3D Report Full Report

Validation slider image for 9RB6

This is version 1.0 of the entry. See complete history

Literature

Stochastic misfolding drives the emergence of distinct alpha-synuclein strains.

So, R.W.L.Frieg, B.Camino, J.D.Situ, C.Metri, M.N.Silver, N.R.G.Li, L.Y.Mao, A.Stuart, E.Schroder, G.F.Watts, J.C.

(2026) Neuron 

  • DOI: https://doi.org/10.1016/j.neuron.2026.01.014
  • Primary Citation Related Structures: 
    9RB3, 9RB6, 9RB7, 9RB8, 9RB9, 9RBA, 9RBB

  • PubMed Abstract: 

    α-Synuclein conformational strains provide a potential explanation for the clinical and pathological differences among synucleinopathies such as Parkinson's disease and multiple system atrophy. However, how distinct α-synuclein strains arise remains unknown. Here, we observed conformational heterogeneity between individual preparations of α-synuclein pre-formed fibrils (PFFs) generated by polymerizing wild-type or A53T-mutant human α-synuclein under identical conditions. Moreover, we found that α-synuclein aggregates formed spontaneously in the brains of a transgenic synucleinopathy mouse model are conformationally diverse. Propagation of stochastically formed PFF- and brain-derived α-synuclein strains in mice initiated several distinct synucleinopathies. The conformational diversity of α-synuclein aggregates across PFF preparations and between individual mice demonstrates that α-synuclein can spontaneously form multiple self-propagating strains within an identical environment. This suggests that stochastic misfolding into distinct aggregate structures drives the emergence of α-synuclein strains and reveals that the intrinsic variability of common synucleinopathy research tools must be considered when designing and interpreting experiments.


  • Organizational Affiliation
    • Tanz Centre for Research in Neurodegenerative Diseases, University of Toronto, Toronto, ON M5T 0S8, Canada; Department of Biochemistry, Temerty Faculty of Medicine, University of Toronto, Toronto, ON M5S 1A8, Canada.

Macromolecule Content 

  • Total Structure Weight: 145.06 kDa 
  • Atom Count: 4,310 
  • Modeled Residue Count: 620 
  • Deposited Residue Count: 1,400 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Alpha-synuclein
A, B, C, D, E
A, B, C, D, E, F, G, H, I, J
140Homo sapiensMutation(s): 1 
Gene Names: SNCANACPPARK1
UniProt & NIH Common Fund Data Resources
Find proteins for P37840 (Homo sapiens)
Explore P37840 
Go to UniProtKB:  P37840
PHAROS:  P37840
GTEx:  ENSG00000145335 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP37840
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.02 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: HELICAL 

Structure Validation

View Full Validation Report



Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Canadian Institutes of Health Research (CIHR)Canada--
Helmholtz AssociationGermany--

Revision History  (Full details and data files)

  • Version 1.0: 2026-03-11
    Type: Initial release