9OQ6 | pdb_00009oq6

Structure of the human sweet receptor bound to advantame in the loose state, extracellular domain


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.57 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report

Validation slider image for 9OQ6

This is version 1.1 of the entry. See complete history

Literature

Structure and activation mechanism of human sweet taste receptor.

Wang, H.Chen, X.Dai, Y.Pidathala, S.Niu, Y.Zhao, C.Li, S.Wang, L.Lee, C.H.

(2025) Cell Res 35: 775-778

Macromolecule Content 

  • Total Structure Weight: 184.79 kDa 
  • Atom Count: 8,170 
  • Modeled Residue Count: 1,028 
  • Deposited Residue Count: 1,650 
  • Unique protein chains: 2

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Taste receptor type 1 member 2818Homo sapiensMutation(s): 0 
Gene Names: TAS1R2GPR71T1R2TR2
UniProt & NIH Common Fund Data Resources
Find proteins for Q8TE23 (Homo sapiens)
Explore Q8TE23 
Go to UniProtKB:  Q8TE23
PHAROS:  Q8TE23
GTEx:  ENSG00000179002 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ8TE23
Sequence Annotations
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Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 2
MoleculeChains  Sequence LengthOrganismDetailsImage
Taste receptor type 1 member 3832Homo sapiensMutation(s): 0 
Gene Names: TAS1R3T1R3TR3
UniProt & NIH Common Fund Data Resources
Find proteins for Q7RTX0 (Homo sapiens)
Explore Q7RTX0 
Go to UniProtKB:  Q7RTX0
PHAROS:  Q7RTX0
GTEx:  ENSG00000169962 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ7RTX0
Sequence Annotations
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Reference Sequence

Small Molecules

Ligands 1 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
A1CD7
(Subject of Investigation/LOI)

Query on A1CD7



Download:Ideal Coordinates CCD File
C [auth A]advantame
C24 H30 N2 O7
YTKBWWKAVMSYHE-OALUTQOASA-N

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.57 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX

Structure Validation

View Full Validation Report



Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesGM143282

Revision History  (Full details and data files)

  • Version 1.0: 2025-09-03
    Type: Initial release
  • Version 1.1: 2025-11-19
    Changes: Data collection, Database references