9KRH | pdb_00009krh

human creatine transporter

PDB DOI: https://doi.org/10.2210/pdb9KRH/pdb
EM Map EMD-62527: EMDB EMDataResource

Classification: MEMBRANE PROTEIN
Organism(s): Homo sapiens
Expression System: Homo sapiens
Mutation(s): No
Membrane Protein: Yes mpstruc

Deposited: 2024-11-27 Released: 2025-05-21
Deposition Author(s): Yu, J., Ge, J.P., Chen, J.H.
Funding Organization(s): Chinese Academy of Sciences

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.40 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

Validation slider image for 9KRH

This is version 1.0 of the entry. See complete history.

Literature

Transport and inhibition mechanisms of human creatine transporter.

Chen, J., Zhang, Y., Chen, N., Ge, J., Yu, J.

(2025) Cell Discov 11: 43-43

PubMed: 40325013 Search on PubMed Search on PubMed Central
DOI: https://doi.org/10.1038/s41421-025-00801-4
Primary Citation Related Structures:
9KR7, 9KRH, 9KRI

Organizational Affiliation

Interdisciplinary Research Center on Biology and Chemistry, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai, China.

Macromolecule Content

Total Structure Weight: 70.76 kDa
Atom Count: 4,231
Modeled Residue Count: 532
Deposited Residue Count: 635
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Sodium- and chloride-dependent creatine transporter 1	A	635	Homo sapiens	Mutation(s): 0 Gene Names: SLC6A8 Membrane Entity: Yes
UniProt & NIH Common Fund Data Resources
Find proteins for P48029 (Homo sapiens) Explore P48029 Go to UniProtKB: P48029
PHAROS: P48029 GTEx: ENSG00000130821
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P48029
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 3 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
CRN Query on CRN Download:Ideal Coordinates CCD File SDF format, chain B [auth A] MOL2 format, chain B [auth A] mmCIF format, chain B [auth A]	B [auth A]	N-[(E)-AMINO(IMINO)METHYL]-N-METHYLGLYCINE C₄ H₉ N₃ O₂ CVSVTCORWBXHQV-UHFFFAOYSA-N		Interactions Focus chain B [auth A] Interactions & Density Focus chain B [auth A]
CL Query on CL Download:Ideal Coordinates CCD File SDF format, chain C [auth A] MOL2 format, chain C [auth A] mmCIF format, chain C [auth A]	C [auth A]	CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M		Interactions Focus chain C [auth A] Interactions & Density Focus chain C [auth A]
NA Query on NA Download:Ideal Coordinates CCD File SDF format, chain D [auth A] MOL2 format, chain D [auth A] mmCIF format, chain D [auth A]	D [auth A]	SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N		Interactions Focus chain D [auth A] Interactions & Density Focus chain D [auth A]

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.40 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2025-05-21

Deposition Author(s):

Funding Organization	Location	Grant Number
Chinese Academy of Sciences	China	--

Revision History (Full details and data files)

Version 1.0: 2025-05-21
Type: Initial release

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.