Structural and functional characterization of the bacterial Cap3 enzyme in deconjugation and regulation of the cyclic dinucleotide transferase CD-NTase
Li, F.Q., Ma, W.F.To be published.
Experimental Data Snapshot
Starting Model: in silico
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Peptidase | 156 | Escherichia coli | Mutation(s): 0  Gene Names: GOP25_26465 | ||
UniProt | |||||
Find proteins for A0A3J1GR98 (Escherichia coli) Explore A0A3J1GR98  Go to UniProtKB:  A0A3J1GR98 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A3J1GR98 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cyclic GMP-AMP synthase | 27 | Escherichia coli | Mutation(s): 0  Gene Names: ETECE562_01214 | ||
UniProt | |||||
Find proteins for A0A7I8YYL1 (Escherichia coli) Explore A0A7I8YYL1  Go to UniProtKB:  A0A7I8YYL1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A7I8YYL1 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ZN Query on ZN | C [auth A] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 52.051 | α = 90 |
b = 54.843 | β = 90 |
c = 59.606 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
xia2 | data reduction |
xia2 | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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Other government | -- |