Nanobody-mediated activation and inhibition of Staphylococcus aureus MazF
Prolic-Kalinsek, M., Zorzini, V., Haesaerts, S., De Bruyn, P., Loris, R.To be published.
Experimental Data Snapshot
Starting Models: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Endoribonuclease MazF | 133 | Staphylococcus aureus | Mutation(s): 0  Gene Names: mazF, SA1873 EC: 3.1 | ![]() | |
UniProt | |||||
Find proteins for Q7A4G9 (Staphylococcus aureus (strain N315)) Explore Q7A4G9  Go to UniProtKB:  Q7A4G9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q7A4G9 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Nanobody 12 | 136 | Lama glama | Mutation(s): 0  | ![]() | |
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | FA [auth G] GA [auth G] HA [auth G] IA [auth H] J [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
CL Query on CL | AA [auth G] BA [auth G] CA [auth G] DA [auth G] EA [auth G] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
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a = 52.19 | α = 89.85 |
b = 61.27 | β = 83.89 |
c = 97.31 | γ = 67.19 |
Software Name | Purpose |
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PHENIX | refinement |
XDS | data reduction |
XDS | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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Vrije Universiteit Brussel | Belgium | SPR13 |