Rhinovirus A2 uncoating intermediate revealing the natural pocket factor (pH 5.8 and 4 degrees Celsius)
Real-Hohn, A., Blaas, D.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Capsid protein VP1 | 283 | rhinovirus A2 | Mutation(s): 0  | ![]() | |
UniProt | |||||
Find proteins for P04936 (Human rhinovirus 2) Explore P04936  Go to UniProtKB:  P04936 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P04936 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Capsid protein VP2 | 261 | rhinovirus A2 | Mutation(s): 0  | ![]() | |
UniProt | |||||
Find proteins for P04936 (Human rhinovirus 2) Explore P04936  Go to UniProtKB:  P04936 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P04936 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Capsid protein VP3 | 237 | rhinovirus A2 | Mutation(s): 0  | ![]() | |
UniProt | |||||
Find proteins for P04936 (Human rhinovirus 2) Explore P04936  Go to UniProtKB:  P04936 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P04936 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 4 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Capsid protein VP4 | 68 | rhinovirus A2 | Mutation(s): 0  | ![]() | |
UniProt | |||||
Find proteins for P04936 (Human rhinovirus 2) Explore P04936  Go to UniProtKB:  P04936 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P04936 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
DAO (Subject of Investigation/LOI) Query on DAO | E [auth A] | LAURIC ACID C12 H24 O2 POULHZVOKOAJMA-UHFFFAOYSA-N |
Task | Software Package | Version |
---|---|---|
RECONSTRUCTION | RELION | 4.0 |
MODEL REFINEMENT | Coot | 0.9 |
MODEL REFINEMENT | PHENIX | 1.21 |
Funding Organization | Location | Grant Number |
---|---|---|
Austrian Science Fund | Austria | P31392 |