Unraveling the Mycobacterium tuberculosis DNA gyrase-DNA-NBTI complex
Kokot, M., Hrast, M., Feng, L., Mitchenall, L.A., Lawson, D.M., Maxwell, A., Minovski, N., Anderluh, M.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
DNA gyrase subunit B,DNA gyrase subunit A | 756 | Mycobacterium tuberculosis H37Rv | Mutation(s): 0  Gene Names: gyrB, Rv0005, MTCY10H4.03, gyrA, Rv0006, MTCY10H4.04 EC: 5.6.2.2 | ||
UniProt | |||||
Find proteins for P9WG47 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore P9WG47  Go to UniProtKB:  P9WG47 | |||||
Find proteins for P9WG45 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore P9WG45  Go to UniProtKB:  P9WG45 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Groups | P9WG45P9WG47 | ||||
Sequence AnnotationsExpand | |||||
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Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(*AP*GP*CP*CP*GP*TP*AP*G)-3') | C [auth E], E [auth G] | 8 | Mycobacterium tuberculosis H37Rv | ||
Sequence AnnotationsExpand | |||||
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Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 3 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(P*GP*TP*AP*CP*CP*TP*AP*CP*GP*GP*CP*T)-3') | D [auth F], F [auth H] | 12 | synthetic construct | ||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
A1ID9 (Subject of Investigation/LOI) Query on A1ID9 | H | (1~{R})-2-[4-[[4-bromanyl-3,5-bis(fluoranyl)phenyl]methylamino]cyclohexyl]-1-(6-methoxy-1,5-naphthyridin-4-yl)ethanol C24 H26 Br F2 N3 O2 RCLQISQKEHCDJQ-IUSZMWJPSA-N | |||
A1ID8 (Subject of Investigation/LOI) Query on A1ID8 | G [auth H] | (1~{S})-2-[4-[[4-bromanyl-3,5-bis(fluoranyl)phenyl]methylamino]cyclohexyl]-1-(6-methoxy-1,5-naphthyridin-4-yl)ethanol C24 H26 Br F2 N3 O2 RCLQISQKEHCDJQ-HTZUNMPGSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 82.041 | α = 90 |
b = 131.703 | β = 97.23 |
c = 96.281 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
Aimless | data scaling |
DIALS | data reduction |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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Biotechnology and Biological Sciences Research Council (BBSRC) | United Kingdom | BB/P012523/1 |
Biotechnology and Biological Sciences Research Council (BBSRC) | United Kingdom | BB/V006983/1 |