Cryo-EM structure of the tetra-phosphorylated R-domain in Ycf1 reveals key interactions for transport regulation
Carvalho, R.S.A., Rasel, M.S.I., Khandelwal, N.K., Tomasiak, T.M.To be published.
Experimental Data Snapshot
Starting Model: in silico
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Metal resistance protein YCF1 | 1,557 | Saccharomyces cerevisiae | Mutation(s): 1  Gene Names: YCF1, YDR135C, YD9302.11C EC: 7.2.2.2 (PDB Primary Data), 7.6.2.3 (PDB Primary Data) Membrane Entity: Yes  | ||
UniProt | |||||
Find proteins for P39109 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore P39109  Go to UniProtKB:  P39109 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P39109 | ||||
Sequence AnnotationsExpand | |||||
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Modified Residues 2 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
SEP Query on SEP | A | L-PEPTIDE LINKING | C3 H8 N O6 P | SER | |
TPO Query on TPO | A | L-PEPTIDE LINKING | C4 H10 N O6 P | THR |
Task | Software Package | Version |
---|---|---|
MODEL REFINEMENT | PHENIX | 1.20.1 |
RECONSTRUCTION | cryoSPARC | 4.2.1 |
Funding Organization | Location | Grant Number |
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National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) | United States | NIH R01 AI156270 |
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) | United States | NIH S10 OD011981 |