8U5L | pdb_00008u5l

MAU868, a novel human-derived monoclonal neutralizing antibody targeting BK virus VP1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.70 Å
  • R-Value Free: 
    0.216 (Depositor), 0.213 (DCC) 
  • R-Value Work: 
    0.183 (Depositor), 0.180 (DCC) 
  • R-Value Observed: 
    0.185 (Depositor) 

Starting Model: other
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wwPDB Validation 3D Report Full Report

Validation slider image for 8U5L

This is version 1.2 of the entry. See complete history

Literature

Nonclinical and clinical characterization of MAU868, a novel human-derived monoclonal neutralizing antibody targeting BK polyomavirus VP1.

Abend, J.R.Sathe, A.Wrobel, M.B.Knapp, M.Xu, L.Zhao, L.Kim, P.Desai, S.Nguyen, A.Leber, X.C.Hein, A.Scharenberg, M.Shaul, J.Ornelas, E.Wong, K.Pietzonka, T.Sterling, L.M.Hodges, M.R.Pertel, P.Traggiai, E.Patick, A.K.Kovacs, S.J.

(2024) Am J Transplant 24: 1994-2006

  • DOI: https://doi.org/10.1016/j.ajt.2024.07.002
  • Primary Citation Related Structures: 
    8U5L

  • PubMed Abstract: 

    Reactivation of BK polyomavirus (BKPyV) can cause significant kidney and bladder disease in immunocompromised patients. There are currently no effective, BKPyV-specific therapies. MAU868 is a novel, human immunoglobulin (Ig) G1 monoclonal antibody that binds the major capsid protein, VP1, of BKPyV with picomolar affinity, neutralizes infection by the 4 major BKPyV genotypes (EC 50 ranging from 0.009-0.093 μg/mL; EC 90 ranging from 0.102-4.160 μg/mL), and has comparable activity against variants with highly prevalent VP1 polymorphisms. No resistance-associated variants were identified in long-term selection studies, indicating a high in vitro barrier-to-resistance. The high-resolution crystal structure of MAU868 in complex with VP1 pentamer identified 3 key contact residues in VP1 (Y169, R170, and K172). A first-in-human study was conducted to assess the safety, tolerability, and pharmacokinetics of MAU868 following intravenous and subcutaneous administration to healthy adults in a randomized, placebo-controlled, double-blinded, single ascending dose design. MAU868 was safe and well-tolerated. All adverse events were grade 1 and resolved. The pharmacokinetics of MAU868 was typical of a human IgG, with dose-proportional systemic exposure and an elimination half-life ranging between 23 and 30 days. These results demonstrate the potential of MAU868 as a first-in-class therapeutic agent for the treatment or prevention of BKPyV disease.


  • Organizational Affiliation
    • Novartis Institutes for BioMedical Research, Infectious Disease Area, Emeryville, California, USA. Electronic address: joabend@gmail.com.

Macromolecule Content 

  • Total Structure Weight: 281.68 kDa 
  • Atom Count: 19,903 
  • Modeled Residue Count: 2,426 
  • Deposited Residue Count: 2,610 
  • Unique protein chains: 2

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Capsid protein VP1
A, B, C, D, E
269Betapolyomavirus hominisMutation(s): 0 
UniProt
Find proteins for A7VLA4 (BK polyomavirus)
Explore A7VLA4 
Go to UniProtKB:  A7VLA4
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA7VLA4
Sequence Annotations
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Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 2
MoleculeChains  Sequence LengthOrganismDetailsImage
scFv fragment of the monoclonal antibody MAU868F,
G [auth H],
H [auth J],
I [auth K],
J [auth N]
253Homo sapiensMutation(s): 0 

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.70 Å
  • R-Value Free:  0.216 (Depositor), 0.213 (DCC) 
  • R-Value Work:  0.183 (Depositor), 0.180 (DCC) 
  • R-Value Observed: 0.185 (Depositor) 
Space Group: P 42 21 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 224.224α = 90
b = 224.224β = 90
c = 143.937γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
Aimlessdata scaling
XDSdata reduction
PHASERphasing

Structure Validation

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Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Not funded--

Revision History  (Full details and data files)

  • Version 1.0: 2024-08-14
    Type: Initial release
  • Version 1.1: 2024-10-16
    Changes: Structure summary
  • Version 1.2: 2024-11-20
    Changes: Database references