Structural Basis For Receptor Engagement And Virus Neutralization Through Epstein-Barr Virus Gp350
Chen, W.-H., Bu, W., Cohen, J.I., Kanekiyo, M., Joyce, G.M.To be published.
Experimental Data Snapshot
Starting Models: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Complement receptor type 2 | A [auth C] | 129 | Homo sapiens | Mutation(s): 0  Gene Names: CR2, C3DR | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P20023 (Homo sapiens) Explore P20023  Go to UniProtKB:  P20023 | |||||
PHAROS:  P20023 GTEx:  ENSG00000117322  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P20023 | ||||
Glycosylation | |||||
Glycosylation Sites: 2 | Go to GlyGen: P20023-1 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Envelope glycoprotein gp350 | B [auth G] | 431 | Human herpesvirus 4 strain B95-8 | Mutation(s): 0  Gene Names: BLLF1 | |
UniProt | |||||
Find proteins for P03200 (Epstein-Barr virus (strain B95-8)) Explore P03200  Go to UniProtKB:  P03200 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P03200 | ||||
Glycosylation | |||||
Glycosylation Sites: 10 | |||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAG Query on NAG | C D [auth C] F [auth G] G H [auth G] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N | |||
SO4 Query on SO4 | E [auth C] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 157.584 | α = 90 |
b = 49.255 | β = 101.64 |
c = 78.323 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
PHENIX | phasing |
Funding Organization | Location | Grant Number |
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Department of Defense (DOD, United States) | United States | W81XWH-18-2-0040 |