8QY4

Structure of interleukin 11 (gp130 P496L mutant).

  • Classification: IMMUNE SYSTEM
  • Organism(s): Homo sapiens, Mus musculus
  • Expression System: Trichoplusia ni
  • Mutation(s): Yes 

  • Deposited: 2023-10-25 Released: 2024-02-21 
  • Deposition Author(s): Gardner, S., Bubeck, D., Jin, Y.
  • Funding Organization(s): Wellcome Trust, European Research Council (ERC), Engineering and Physical Sciences Research Council, Biotechnology and Biological Sciences Research Council (BBSRC)

Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.06 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history. 


Literature

Structure of interleukin 11 (gp130 P496L mutant).

Gardner, S., Bubeck, D., Jin, Y.

To be published.

Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Interleukin-11A,
C [auth D]		199Homo sapiensMutation(s): 0 
Gene Names: IL11
UniProt & NIH Common Fund Data Resources
Find proteins for P20809 (Homo sapiens)
Explore P20809 
Go to UniProtKB:  P20809
PHAROS:  P20809
GTEx:  ENSG00000095752 
Entity Groups  
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UniProt GroupP20809
Sequence Annotations
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  • Reference Sequence
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Interleukin-6 receptor subunit betaB [auth C],
D [auth F]		917Mus musculusMutation(s): 1 
Gene Names: Il6st
UniProt & NIH Common Fund Data Resources
Find proteins for Q00560 (Mus musculus)
Explore Q00560 
Go to UniProtKB:  Q00560
IMPC:  MGI:96560
Entity Groups  
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UniProt GroupQ00560
Sequence Annotations
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  • Reference Sequence
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(by identity cutoff)  |  3D Structure
Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Interleukin-11 receptor subunit alphaE [auth B],
F [auth E]		422Homo sapiensMutation(s): 0 
Gene Names: IL11RA
UniProt & NIH Common Fund Data Resources
Find proteins for Q14626 (Homo sapiens)
Explore Q14626 
Go to UniProtKB:  Q14626
PHAROS:  Q14626
GTEx:  ENSG00000137070 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ14626
Sequence Annotations
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  • Reference Sequence
Oligosaccharides

Help

Entity ID: 4
MoleculeChains Length2D Diagram Glycosylation3D Interactions
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
G, H, I, J, K
G, H, I, J, K, L
2N-Glycosylation
Glycosylation Resources
GlyTouCan:  G42666HT
GlyCosmos:  G42666HT
GlyGen:  G42666HT
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.06 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX1.21rc1_4933

Structure Validation

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View more in-depth experimental data
Entry History & Funding Information

Deposition Data

Funding OrganizationLocationGrant Number
Wellcome TrustUnited Kingdom202323/Z/16
European Research Council (ERC)European UnionC-206-STG
Engineering and Physical Sciences Research CouncilUnited KingdomEP/X035603/1
Biotechnology and Biological Sciences Research Council (BBSRC)United KingdomBB/M011178/1

Revision History  (Full details and data files)

  • Version 1.0: 2024-02-21
    Type: Initial release