8K24

ICP1 Csy-dsDNA-Cas1-Cas2/3 complex (fully assembled form), C2 symmetry

Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.72 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history. 


Literature

Structure of csy complex with long DNA State2

Zhang, L.X., Feng, Y.

To be published.

Macromolecules

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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
HD Cas3-type domain-containing proteinA [auth a],
DA [auth A]		930Vibrio phage ICP1_2004_AMutation(s): 0 
Gene Names: TUST1-10_00455
UniProt
Find proteins for F1D5V9 (Vibrio phage ICP1_2004_A)
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UniProt GroupF1D5V9
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Csy1B [auth b],
P [auth B]		179Vibrio phage ICP1_2004_AMutation(s): 0 
Gene Names: TUST1-10_00450
UniProt
Find proteins for F1D5V8 (Vibrio phage ICP1_2004_A)
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Csy2C [auth c],
Q [auth C]		248Vibrio phage ICP1_2004_AMutation(s): 0 
Gene Names: TUST1-10_00445
UniProt
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
Cas1D [auth d],
E [auth e],
R [auth D],
S [auth E]		302Vibrio phage ICP1_2004_AMutation(s): 0 
Gene Names: TUST1-10_00460
UniProt
Find proteins for F1D5W0 (Vibrio phage ICP1_2004_A)
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
Csy3306Vibrio phage ICP1_2004_AMutation(s): 0 
Gene Names: TUST1-10_00440
UniProt
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
Csy4G [auth h],
U [auth H]		168Vibrio phage ICP1_2004_AMutation(s): 0 
Gene Names: TUST1-10_00435
UniProt
Find proteins for F1D5V5 (Vibrio phage ICP1_2004_A)
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Entity ID: 7
MoleculeChains LengthOrganismImage
RNA (60-MER)AA [auth P],
M [auth p]		60Vibrio phage ICP1_2004_A
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Entity ID: 8
MoleculeChains LengthOrganismImage
DNA (43-MER)BA [auth Q],
EA [auth U],
N [auth q]		43Vibrio phage ICP1_2004_A
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Entity ID: 9
MoleculeChains LengthOrganismImage
DNA (31-MER)CA [auth R],
O [auth r]		31Vibrio phage ICP1_2004_A
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Entity ID: 10
MoleculeChains LengthOrganismImage
DNA (5'-D(*AP*TP*CP*TP*TP*CP*CP*CP*TP*AP*TP*TP*TP*AP*AP*AP*TP*TP*GP*CP*T)-3')FA [auth V]21Vibrio phage ICP1_2004_A
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Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.72 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

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View more in-depth experimental data
Entry History & Funding Information

Deposition Data

Funding OrganizationLocationGrant Number
National Science Foundation (NSF, China)China32171274

Revision History  (Full details and data files)

  • Version 1.0: 2024-07-17
    Type: Initial release