Download MendeleyStructure of Legionella effector LnaB-actin binary complex
Chen, T.T., Ouyang, S.Y.To be published.
8J9B
LnaB-actin binary complex
- PDB DOI: https://doi.org/10.2210/pdb8J9B/pdb
- Classification: TRANSFERASE
- Organism(s): Oryctolagus cuniculus, Legionella pneumophila
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2023-05-03 Released: 2024-05-08
- Funding Organization(s): National Natural Science Foundation of China (NSFC)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 3.42 Å
- R-Value Free: 0.298
- R-Value Work: 0.287
Starting Model: in silico
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wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Actin gamma 1 | 375 | Oryctolagus cuniculus | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for A0A8C6VAB1 (Naja naja) Explore A0A8C6VAB1 Go to UniProtKB: A0A8C6VAB1 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A8C6VAB1 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Type IV secretion protein Dot | G [auth H], H [auth I], I [auth J], J [auth K] | 441 | Legionella pneumophila | Mutation(s): 0 Gene Names: C3927_12730 |  |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 3.42 Å
- R-Value Free: 0.298
- R-Value Work: 0.287
- Space Group: P 31
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 110.577 | α = 90 |
| b = 110.577 | β = 90 |
| c = 407.927 | γ = 120 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| XDS | data reduction |
| Aimless | data scaling |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2024-05-08 Deposition Author(s): Chen, T.T., Ouyang, S.Y.
| Funding Organization | Location | Grant Number |
|---|---|---|
| National Natural Science Foundation of China (NSFC) | China | -- |
Revision History (Full details and data files)
- Version 1.0: 2024-05-08
Type: Initial release
