Crystal structure of the L. monocytogenes RmlT D198A variant in complex with TDP-rhamnose
Monteiro, R., Cereija, T.B., Morais-Cabral, J.H., Cabanes, D.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Glycosyltransferase | 624 | Listeria monocytogenes | Mutation(s): 1  Gene Names: APD94_03445 | ||
UniProt | |||||
Find proteins for A0A401AAP7 (Listeria monocytogenes) Explore A0A401AAP7  Go to UniProtKB:  A0A401AAP7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A401AAP7 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
TRH (Subject of Investigation/LOI) Query on TRH | I [auth A] K [auth B] P [auth C] R [auth D] V [auth E] | 2'-DEOXY-THYMIDINE-BETA-L-RHAMNOSE C16 H26 N2 O15 P2 ZOSQFDVXNQFKBY-CGAXJHMRSA-N | |||
TAR Query on TAR | AA [auth F], BA [auth F], M [auth B], S [auth D], W [auth E] | D(-)-TARTARIC ACID C4 H6 O6 FEWJPZIEWOKRBE-LWMBPPNESA-N | |||
CL Query on CL | L [auth B], Z [auth F] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M | |||
MG Query on MG | G [auth A] H [auth A] J [auth B] N [auth C] O [auth C] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 87.397 | α = 90 |
b = 292.381 | β = 100.498 |
c = 93.075 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
XDS | data scaling |
PHASER | phasing |
XDS | data reduction |
Funding Organization | Location | Grant Number |
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Fundacao para a Ciencia e a Tecnologia | Portugal | -- |