8YXO | pdb_00008yxo

Structure of Phosphoprotein tetramer from mumps virus


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.49 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report

Validation slider image for 8YXO

This is version 1.0 of the entry. See complete history

Literature

Structures of the mumps virus polymerase complex via cryo-electron microscopy.

Li, T.Liu, M.Gu, Z.Su, X.Liu, Y.Lin, J.Zhang, Y.Shen, Q.T.

(2024) Nat Commun 15: 4189-4189

  • DOI: https://doi.org/10.1038/s41467-024-48389-9
  • Primary Citation Related Structures: 
    8IZL, 8X01, 8YXL, 8YXM, 8YXO, 8YXP, 8YXR

  • PubMed Abstract: 

    The viral polymerase complex, comprising the large protein (L) and phosphoprotein (P), is crucial for both genome replication and transcription in non-segmented negative-strand RNA viruses (nsNSVs), while structures corresponding to these activities remain obscure. Here, we resolved two L-P complex conformations from the mumps virus (MuV), a typical member of nsNSVs, via cryogenic-electron microscopy. One conformation presents all five domains of L forming a continuous RNA tunnel to the methyltransferase domain (MTase), preferably as a transcription state. The other conformation has the appendage averaged out, which is inaccessible to MTase. In both conformations, parallel P tetramers are revealed around MuV L, which, together with structures of other nsNSVs, demonstrates the diverse origins of the L-binding X domain of P. Our study links varying structures of nsNSV polymerase complexes with genome replication and transcription and points to a sliding model for polymerase complexes to advance along the RNA templates.


  • Organizational Affiliation
    • School of Life Sciences, Department of Chemical Biology, Southern University of Science and Technology, Shenzhen, 518055, China.

Macromolecule Content 

  • Total Structure Weight: 166.6 kDa 
  • Atom Count: 2,096 
  • Modeled Residue Count: 278 
  • Deposited Residue Count: 1,564 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
PhosphoproteinA [auth C],
B [auth D],
C [auth E],
D [auth B]
391Mumps orthorubulavirusMutation(s): 0 
UniProt
Find proteins for C0JJ97 (Mumps virus genotype A (strain Jeryl-Lynn))
Explore C0JJ97 
Go to UniProtKB:  C0JJ97
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupC0JJ97
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.49 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

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Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Science Foundation (NSF, China)China--

Revision History  (Full details and data files)

  • Version 1.0: 2024-06-05
    Type: Initial release