8WP0 | pdb_00008wp0

Structure of the Arabidopsis E529Q/E1174Q ABCB19 in the ATP bound state


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.40 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report

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This is version 1.2 of the entry. See complete history

Literature

Structure and function of the Arabidopsis ABC transporter ABCB19 in brassinosteroid export.

Ying, W.Wang, Y.Wei, H.Luo, Y.Ma, Q.Zhu, H.Janssens, H.Vukasinovic, N.Kvasnica, M.Winne, J.M.Gao, Y.Tan, S.Friml, J.Liu, X.Russinova, E.Sun, L.

(2024) Science 383: eadj4591-eadj4591

  • DOI: https://doi.org/10.1126/science.adj4591
  • Primary Citation Related Structures: 
    8WOI, 8WOM, 8WOO, 8WP0

  • PubMed Abstract: 

    Brassinosteroids are steroidal phytohormones that regulate plant development and physiology, including adaptation to environmental stresses. Brassinosteroids are synthesized in the cell interior but bind receptors at the cell surface, necessitating a yet to be identified export mechanism. Here, we show that a member of the ATP-binding cassette (ABC) transporter superfamily, ABCB19, functions as a brassinosteroid exporter. We present its structure in both the substrate-unbound and the brassinosteroid-bound states. Bioactive brassinosteroids are potent activators of ABCB19 ATP hydrolysis activity, and transport assays showed that ABCB19 transports brassinosteroids. In Arabidopsis thaliana , ABCB19 and its close homolog, ABCB1, positively regulate brassinosteroid responses. Our results uncover an elusive export mechanism for bioactive brassinosteroids that is tightly coordinated with brassinosteroid signaling.


  • Organizational Affiliation
    • Department of Neurology of The First Affiliated Hospital of USTC, MOE Key Laboratory for Membraneless Organelles and Cellular Dynamics, Hefei National Research Center for Physical Sciences at the Microscale, Biomedical Sciences and Health Laboratory of Anhui Province, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei 230027, China.

Macromolecule Content 

  • Total Structure Weight: 137.99 kDa 
  • Atom Count: 9,372 
  • Modeled Residue Count: 1,217 
  • Deposited Residue Count: 1,252 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
ABC transporter B family member 191,252Arabidopsis thalianaMutation(s): 2 
Gene Names: ABCB19
Membrane Entity: Yes 
UniProt
Find proteins for Q9LJX0 (Arabidopsis thaliana)
Explore Q9LJX0 
Go to UniProtKB:  Q9LJX0
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9LJX0
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.40 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX1.13_2998:

Structure Validation

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Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Chinese Academy of SciencesChinaXDB37020103
National Natural Science Foundation of China (NSFC)China31900885; 31870732; 32322041

Revision History  (Full details and data files)

  • Version 1.0: 2024-03-13
    Type: Initial release
  • Version 1.1: 2024-04-03
    Changes: Database references
  • Version 1.2: 2025-09-17
    Changes: Advisory, Data collection, Derived calculations, Structure summary