8VVU | pdb_00008vvu

Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA

PDB DOI: https://doi.org/10.2210/pdb8VVU/pdb
EM Map EMD-43569: EMDB EMDataResource
NAKB: 8VVU

Classification: RIBOSOME/ANTIBIOTIC
Organism(s): Oryctolagus cuniculus, Bos taurus, Lampyridae
Expression System: in vitro transcription vector pT7-Fluc(deltai)
Mutation(s): No

Deposited: 2024-01-31 Released: 2025-07-30
Deposition Author(s): Loerch, S., Petrossian, E., Smith, P.R., Campbell, Z.T.
Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.80 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Rapid purification reveals structural insights into transient ribosome states

Loerch, S., Petrossian, E., Smith, P.R., Campbell, P.R.

To be published.

Macromolecule Content

Total Structure Weight: 3,503.26 kDa
Atom Count: 218,724
Modeled Residue Count: 17,534
Deposited Residue Count: 19,784
Unique protein chains: 78
Unique nucleic acid chains: 8

Macromolecules

Find similar proteins by:

| 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
uL2	A	257	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TT27 (Oryctolagus cuniculus) Explore G1TT27 Go to UniProtKB: G1TT27
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TT27
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
uL3	B	403	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TL06 (Oryctolagus cuniculus) Explore G1TL06 Go to UniProtKB: G1TL06
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TL06
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
uL4	C	413	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1SVW5 (Oryctolagus cuniculus) Explore G1SVW5 Go to UniProtKB: G1SVW5
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1SVW5
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 4
Molecule	Chains	Sequence Length	Organism	Details	Image
uL18	D	297	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for P19949 (Oryctolagus cuniculus) Explore P19949 Go to UniProtKB: P19949
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P19949
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 5
Molecule	Chains	Sequence Length	Organism	Details	Image
L6	E	291	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1SKF7 (Oryctolagus cuniculus) Explore G1SKF7 Go to UniProtKB: G1SKF7
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1SKF7
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 6
Molecule	Chains	Sequence Length	Organism	Details	Image
uL30	F	249	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1SV32 (Oryctolagus cuniculus) Explore G1SV32 Go to UniProtKB: G1SV32
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1SV32
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 7
Molecule	Chains	Sequence Length	Organism	Details	Image
L7A	G	319	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1STW0 (Oryctolagus cuniculus) Explore G1STW0 Go to UniProtKB: G1STW0
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1STW0
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 8
Molecule	Chains	Sequence Length	Organism	Details	Image
L9	H	192	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1SWI6 (Oryctolagus cuniculus) Explore G1SWI6 Go to UniProtKB: G1SWI6
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1SWI6
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 9
Molecule	Chains	Sequence Length	Organism	Details	Image
L10	I	214	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for B7NZQ2 (Oryctolagus cuniculus) Explore B7NZQ2 Go to UniProtKB: B7NZQ2
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	B7NZQ2
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 10
Molecule	Chains	Sequence Length	Organism	Details	Image
uL5	J	178	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TUB8 (Oryctolagus cuniculus) Explore G1TUB8 Go to UniProtKB: G1TUB8
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TUB8
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 11
Molecule	Chains	Sequence Length	Organism	Details	Image
eL13	K	211	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TPV0 (Oryctolagus cuniculus) Explore G1TPV0 Go to UniProtKB: G1TPV0
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TPV0
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 12
Molecule	Chains	Sequence Length	Organism	Details	Image
eL14	L	218	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1SZ12 (Oryctolagus cuniculus) Explore G1SZ12 Go to UniProtKB: G1SZ12
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1SZ12
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 13
Molecule	Chains	Sequence Length	Organism	Details	Image
L15	M	204	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1T0C1 (Oryctolagus cuniculus) Explore G1T0C1 Go to UniProtKB: G1T0C1
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1T0C1
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 14
Molecule	Chains	Sequence Length	Organism	Details	Image
uL13	N	203	Oryctolagus cuniculus	Mutation(s): 0

Find similar proteins by:

| 3D Structure

Entity ID: 15
Molecule	Chains	Sequence Length	Organism	Details	Image
uL22	O	213	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1SCJ6 (Oryctolagus cuniculus) Explore G1SCJ6 Go to UniProtKB: G1SCJ6
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1SCJ6
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 16
Molecule	Chains	Sequence Length	Organism	Details	Image
eL18	P	188	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TFE0 (Oryctolagus cuniculus) Explore G1TFE0 Go to UniProtKB: G1TFE0
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TFE0
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 17
Molecule	Chains	Sequence Length	Organism	Details	Image
eL19	Q	212	Oryctolagus cuniculus	Mutation(s): 0

Find similar proteins by:

| 3D Structure

Entity ID: 18
Molecule	Chains	Sequence Length	Organism	Details	Image
L18A	R	224	Oryctolagus cuniculus	Mutation(s): 0

Find similar proteins by:

| 3D Structure

Entity ID: 19
Molecule	Chains	Sequence Length	Organism	Details	Image
eL21	S	160	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1SHQ2 (Oryctolagus cuniculus) Explore G1SHQ2 Go to UniProtKB: G1SHQ2
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1SHQ2
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 20
Molecule	Chains	Sequence Length	Organism	Details	Image
eL22	T	128	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TSG1 (Oryctolagus cuniculus) Explore G1TSG1 Go to UniProtKB: G1TSG1
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TSG1
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 21
Molecule	Chains	Sequence Length	Organism	Details	Image
L23	U	140	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1T6D1 (Oryctolagus cuniculus) Explore G1T6D1 Go to UniProtKB: G1T6D1
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1T6D1
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 22
Molecule	Chains	Sequence Length	Organism	Details	Image
uL24	V	157	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1SE28 (Oryctolagus cuniculus) Explore G1SE28 Go to UniProtKB: G1SE28
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1SE28
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 23
Molecule	Chains	Sequence Length	Organism	Details	Image
uL23	W	156	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1SE76 (Oryctolagus cuniculus) Explore G1SE76 Go to UniProtKB: G1SE76
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1SE76
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 24
Molecule	Chains	Sequence Length	Organism	Details	Image
L26	X	145	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1SQH0 (Oryctolagus cuniculus) Explore G1SQH0 Go to UniProtKB: G1SQH0
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1SQH0
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 25
Molecule	Chains	Sequence Length	Organism	Details	Image
L27	Y	136	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TXF6 (Oryctolagus cuniculus) Explore G1TXF6 Go to UniProtKB: G1TXF6
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TXF6
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 26
Molecule	Chains	Sequence Length	Organism	Details	Image
L27A	Z	148	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1SNY0 (Oryctolagus cuniculus) Explore G1SNY0 Go to UniProtKB: G1SNY0
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1SNY0
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 27
Molecule	Chains	Sequence Length	Organism	Details	Image
L29	AA	245	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1SGR6 (Oryctolagus cuniculus) Explore G1SGR6 Go to UniProtKB: G1SGR6
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1SGR6
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 28
Molecule	Chains	Sequence Length	Organism	Details	Image
eL30	BA	115	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TDL2 (Oryctolagus cuniculus) Explore G1TDL2 Go to UniProtKB: G1TDL2
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TDL2
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 29
Molecule	Chains	Sequence Length	Organism	Details	Image
L31	CA	125	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1SHG0 (Oryctolagus cuniculus) Explore G1SHG0 Go to UniProtKB: G1SHG0
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1SHG0
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 30
Molecule	Chains	Sequence Length	Organism	Details	Image
L32	DA	135	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TUN8 (Oryctolagus cuniculus) Explore G1TUN8 Go to UniProtKB: G1TUN8
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TUN8
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 31
Molecule	Chains	Sequence Length	Organism	Details	Image
eL33	EA	110	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1SF08 (Oryctolagus cuniculus) Explore G1SF08 Go to UniProtKB: G1SF08
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1SF08
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 32
Molecule	Chains	Sequence Length	Organism	Details	Image
L34	FA	129	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TXG5 (Oryctolagus cuniculus) Explore G1TXG5 Go to UniProtKB: G1TXG5
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TXG5
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 33
Molecule	Chains	Sequence Length	Organism	Details	Image
L35	GA	123	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1SIT5 (Oryctolagus cuniculus) Explore G1SIT5 Go to UniProtKB: G1SIT5
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1SIT5
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 34
Molecule	Chains	Sequence Length	Organism	Details	Image
L36	HA	105	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TTQ5 (Oryctolagus cuniculus) Explore G1TTQ5 Go to UniProtKB: G1TTQ5
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TTQ5
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 35
Molecule	Chains	Sequence Length	Organism	Details	Image
L37	IA	97	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for U3KPD5 (Oryctolagus cuniculus) Explore U3KPD5 Go to UniProtKB: U3KPD5
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	U3KPD5
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 36
Molecule	Chains	Sequence Length	Organism	Details	Image
eL38	JA	70	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1U001 (Oryctolagus cuniculus) Explore G1U001 Go to UniProtKB: G1U001
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1U001
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 37
Molecule	Chains	Sequence Length	Organism	Details	Image
eL39	KA	51	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TTN1 (Oryctolagus cuniculus) Explore G1TTN1 Go to UniProtKB: G1TTN1
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TTN1
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 38
Molecule	Chains	Sequence Length	Organism	Details	Image
eL40	LA	128	Oryctolagus cuniculus	Mutation(s): 0

Find similar proteins by: Sequence | 3D Structure

Entity ID: 39
Molecule	Chains	Sequence Length	Organism	Details	Image
eL41	MA	25	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for A0A087WNH4 (Oryctolagus cuniculus) Explore A0A087WNH4 Go to UniProtKB: A0A087WNH4
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	A0A087WNH4
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 40
Molecule	Chains	Sequence Length	Organism	Details	Image
eL42	NA	106	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1T040 (Oryctolagus cuniculus) Explore G1T040 Go to UniProtKB: G1T040
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1T040
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 41
Molecule	Chains	Sequence Length	Organism	Details	Image
eL43	OA	92	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1SY53 (Oryctolagus cuniculus) Explore G1SY53 Go to UniProtKB: G1SY53
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1SY53
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 42
Molecule	Chains	Sequence Length	Organism	Details	Image
L28	PA	137	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1U7L1 (Oryctolagus cuniculus) Explore G1U7L1 Go to UniProtKB: G1U7L1
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1U7L1
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 43
Molecule	Chains	Sequence Length	Organism	Details	Image
L12	QA [auth RA]	165	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1SMR7 (Oryctolagus cuniculus) Explore G1SMR7 Go to UniProtKB: G1SMR7
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1SMR7
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 51
Molecule	Chains	Sequence Length	Organism	Details	Image
RPSA	YA [auth AB]	295	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TLT8 (Oryctolagus cuniculus) Explore G1TLT8 Go to UniProtKB: G1TLT8
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TLT8
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 52
Molecule	Chains	Sequence Length	Organism	Details	Image
S3A	ZA [auth BB]	264	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1SS70 (Oryctolagus cuniculus) Explore G1SS70 Go to UniProtKB: G1SS70
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1SS70
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 53
Molecule	Chains	Sequence Length	Organism	Details	Image
S2-like	AB [auth CB]	293	Oryctolagus cuniculus	Mutation(s): 0

Find similar proteins by:

| 3D Structure

Entity ID: 54
Molecule	Chains	Sequence Length	Organism	Details	Image
S3	BB [auth DB]	281	Oryctolagus cuniculus	Mutation(s): 0 EC: 4.2.99.18
UniProt
Find proteins for G1TNM3 (Oryctolagus cuniculus) Explore G1TNM3 Go to UniProtKB: G1TNM3
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TNM3
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 55
Molecule	Chains	Sequence Length	Organism	Details	Image
S4	CB [auth EB]	263	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TK17 (Oryctolagus cuniculus) Explore G1TK17 Go to UniProtKB: G1TK17
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TK17
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 56
Molecule	Chains	Sequence Length	Organism	Details	Image
S5	DB [auth FB]	204	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TFM5 (Oryctolagus cuniculus) Explore G1TFM5 Go to UniProtKB: G1TFM5
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TFM5
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 57
Molecule	Chains	Sequence Length	Organism	Details	Image
eS6	EB [auth GB]	249	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TM55 (Oryctolagus cuniculus) Explore G1TM55 Go to UniProtKB: G1TM55
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TM55
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 58
Molecule	Chains	Sequence Length	Organism	Details	Image
eS7	FB [auth HB]	432	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1SVB0 (Oryctolagus cuniculus) Explore G1SVB0 Go to UniProtKB: G1SVB0
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1SVB0
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 59
Molecule	Chains	Sequence Length	Organism	Details	Image
S8	GB [auth IB]	208	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TJW1 (Oryctolagus cuniculus) Explore G1TJW1 Go to UniProtKB: G1TJW1
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TJW1
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 60
Molecule	Chains	Sequence Length	Organism	Details	Image
S9	HB [auth JB]	194	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for B7NZS8 (Oryctolagus cuniculus) Explore B7NZS8 Go to UniProtKB: B7NZS8
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	B7NZS8
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 61
Molecule	Chains	Sequence Length	Organism	Details	Image
S10	IB [auth KB]	165	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TPV3 (Oryctolagus cuniculus) Explore G1TPV3 Go to UniProtKB: G1TPV3
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TPV3
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 62
Molecule	Chains	Sequence Length	Organism	Details	Image
S11	JB [auth LB]	158	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TRM4 (Oryctolagus cuniculus) Explore G1TRM4 Go to UniProtKB: G1TRM4
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TRM4
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 63
Molecule	Chains	Sequence Length	Organism	Details	Image
S12	KB [auth MB]	132	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1SFR8 (Oryctolagus cuniculus) Explore G1SFR8 Go to UniProtKB: G1SFR8
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1SFR8
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 64
Molecule	Chains	Sequence Length	Organism	Details	Image
uS15	LB [auth NB]	151	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1SP51 (Oryctolagus cuniculus) Explore G1SP51 Go to UniProtKB: G1SP51
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1SP51
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 65
Molecule	Chains	Sequence Length	Organism	Details	Image
S14	MB [auth OB]	151	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1T1F0 (Oryctolagus cuniculus) Explore G1T1F0 Go to UniProtKB: G1T1F0
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1T1F0
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 66
Molecule	Chains	Sequence Length	Organism	Details	Image
S15	NB [auth PB]	145	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1U0Q2 (Oryctolagus cuniculus) Explore G1U0Q2 Go to UniProtKB: G1U0Q2
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1U0Q2
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 67
Molecule	Chains	Sequence Length	Organism	Details	Image
uS9	OB [auth QB]	172	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1SGX4 (Oryctolagus cuniculus) Explore G1SGX4 Go to UniProtKB: G1SGX4
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1SGX4
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 68
Molecule	Chains	Sequence Length	Organism	Details	Image
eS17	PB [auth RB]	135	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TU13 (Oryctolagus cuniculus) Explore G1TU13 Go to UniProtKB: G1TU13
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TU13
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 69
Molecule	Chains	Sequence Length	Organism	Details	Image
S18	QB [auth SB]	152	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TPG3 (Oryctolagus cuniculus) Explore G1TPG3 Go to UniProtKB: G1TPG3
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TPG3
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 70
Molecule	Chains	Sequence Length	Organism	Details	Image
S19	RB [auth TB]	145	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TN62 (Oryctolagus cuniculus) Explore G1TN62 Go to UniProtKB: G1TN62
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TN62
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 71
Molecule	Chains	Sequence Length	Organism	Details	Image
uS10	SB [auth UB]	119	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1SIZ2 (Oryctolagus cuniculus) Explore G1SIZ2 Go to UniProtKB: G1SIZ2
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1SIZ2
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 72
Molecule	Chains	Sequence Length	Organism	Details	Image
S21	TB [auth VB]	83	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TM82 (Oryctolagus cuniculus) Explore G1TM82 Go to UniProtKB: G1TM82
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TM82
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 73
Molecule	Chains	Sequence Length	Organism	Details	Image
S15A	UB [auth WB]	130	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TG89 (Oryctolagus cuniculus) Explore G1TG89 Go to UniProtKB: G1TG89
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TG89
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 74
Molecule	Chains	Sequence Length	Organism	Details	Image
S23	VB [auth XB]	143	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1SZ47 (Oryctolagus cuniculus) Explore G1SZ47 Go to UniProtKB: G1SZ47
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1SZ47
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 75
Molecule	Chains	Sequence Length	Organism	Details	Image
S24	WB [auth YB]	131	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1T3D8 (Oryctolagus cuniculus) Explore G1T3D8 Go to UniProtKB: G1T3D8
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1T3D8
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 76
Molecule	Chains	Sequence Length	Organism	Details	Image
eS25	XB [auth ZB]	124	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TDB3 (Oryctolagus cuniculus) Explore G1TDB3 Go to UniProtKB: G1TDB3
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TDB3
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 77
Molecule	Chains	Sequence Length	Organism	Details	Image
S26	YB [auth AC]	115	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TFE8 (Oryctolagus cuniculus) Explore G1TFE8 Go to UniProtKB: G1TFE8
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TFE8
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 78
Molecule	Chains	Sequence Length	Organism	Details	Image
S27	ZB [auth BC]	84	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TZ76 (Oryctolagus cuniculus) Explore G1TZ76 Go to UniProtKB: G1TZ76
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TZ76
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 79
Molecule	Chains	Sequence Length	Organism	Details	Image
S28	AC [auth CC]	69	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1TIB4 (Oryctolagus cuniculus) Explore G1TIB4 Go to UniProtKB: G1TIB4
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1TIB4
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 80
Molecule	Chains	Sequence Length	Organism	Details	Image
uS14	BC [auth DC]	56	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1U7M4 (Oryctolagus cuniculus) Explore G1U7M4 Go to UniProtKB: G1U7M4
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1U7M4
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 81
Molecule	Chains	Sequence Length	Organism	Details	Image
S30	CC [auth EC]	133	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1T8A2 (Oryctolagus cuniculus) Explore G1T8A2 Go to UniProtKB: G1T8A2
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1T8A2
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 82
Molecule	Chains	Sequence Length	Organism	Details	Image
S27A	DC [auth FC]	188	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1SK22 (Oryctolagus cuniculus) Explore G1SK22 Go to UniProtKB: G1SK22
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1SK22
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

| 3D Structure

Entity ID: 83
Molecule	Chains	Sequence Length	Organism	Details	Image
RACK1	EC [auth GC]	317	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1SJB4 (Oryctolagus cuniculus) Explore G1SJB4 Go to UniProtKB: G1SJB4
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1SJB4
Sequence Annotations Expand
Reference Sequence

Find similar proteins by: Sequence | 3D Structure

Entity ID: 84
Molecule	Chains	Sequence Length	Organism	Details	Image
nascent chain	FC [auth IC]	4	Oryctolagus cuniculus	Mutation(s): 0

Find similar proteins by:

| 3D Structure

Entity ID: 85
Molecule	Chains	Sequence Length	Organism	Details	Image
RPLP0	GC [auth b]	318	Oryctolagus cuniculus	Mutation(s): 0
UniProt
Find proteins for G1SPK4 (Oryctolagus cuniculus) Explore G1SPK4 Go to UniProtKB: G1SPK4
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G1SPK4
Sequence Annotations Expand
Reference Sequence

Find similar nucleic acids by:

(by identity cutoff)

Molecule	Chains	Length	Organism
Entity ID: 44
P-site tRNA	RA [auth SA]	76	Bos taurus
Sequence Annotations Expand
Reference Sequence

Find similar nucleic acids by:

(by identity cutoff)

Molecule	Chains	Length	Organism
Entity ID: 45
E-site tRNA	SA [auth TA]	76	Oryctolagus cuniculus
Sequence Annotations Expand
Reference Sequence

Find similar nucleic acids by: Sequence

Molecule	Chains	Length	Organism
Entity ID: 46
mRNA	TA [auth VA]	12	Lampyridae
Sequence Annotations Expand
Reference Sequence

Find similar nucleic acids by:

(by identity cutoff)

Molecule	Chains	Length	Organism
Entity ID: 47
28S rRNA	UA [auth WA]	3,584	Oryctolagus cuniculus
Sequence Annotations Expand
Reference Sequence

Find similar nucleic acids by:

(by identity cutoff)

Molecule	Chains	Length	Organism
Entity ID: 48
5S rRNA	VA [auth XA]	120	Oryctolagus cuniculus
Sequence Annotations Expand
Reference Sequence

Find similar nucleic acids by:

(by identity cutoff)

Molecule	Chains	Length	Organism
Entity ID: 49
5.8S rRNA	WA [auth YA]	156	Oryctolagus cuniculus
Sequence Annotations Expand
Reference Sequence

Find similar nucleic acids by:

(by identity cutoff)

Molecule	Chains	Length	Organism
Entity ID: 50
18S rRNA	XA [auth ZA]	1,869	Oryctolagus cuniculus
Sequence Annotations Expand
Reference Sequence

Find similar nucleic acids by:

(by identity cutoff)

Molecule	Chains	Length	Organism
Entity ID: 86
A-site tRNA	HC [auth At]	74	Bos taurus
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 5 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
ANM Query on ANM Download:Ideal Coordinates CCD File SDF format, chain OF [auth WA] MOL2 format, chain OF [auth WA] mmCIF format, chain OF [auth WA]	OF [auth WA]	ANISOMYCIN C₁₄ H₁₉ N O₄ YKJYKKNCCRKFSL-RDBSUJKOSA-N		Interactions Focus chain OF [auth WA] Interactions & Density Focus chain OF [auth WA]
SPD Query on SPD Download:Ideal Coordinates CCD File SDF format, chain PF [auth WA] MOL2 format, chain PF [auth WA] mmCIF format, chain PF [auth WA]	PF [auth WA]	SPERMIDINE C₇ H₁₉ N₃ ATHGHQPFGPMSJY-UHFFFAOYSA-N		Interactions Focus chain PF [auth WA] Interactions & Density Focus chain PF [auth WA]
SER Query on SER Download:Ideal Coordinates CCD File SDF format, chain MG [auth ZA] MOL2 format, chain MG [auth ZA] mmCIF format, chain MG [auth ZA]	MG [auth ZA]	SERINE C₃ H₇ N O₃ MTCFGRXMJLQNBG-REOHCLBHSA-N		Interactions Focus chain MG [auth ZA] Interactions & Density Focus chain MG [auth ZA]
ZN Query on ZN Download:Ideal Coordinates CCD File SDF format, chain JC [auth FA] SDF format, chain LC [auth IA] SDF format, chain MC [auth LA] SDF format, chain NC [auth NA] SDF format, chain OC [auth OA] SDF format, chain OG [auth AC] SDF format, chain PG [auth DC] SDF format, chain QG [auth FC] MOL2 format, chain JC [auth FA] MOL2 format, chain LC [auth IA] MOL2 format, chain MC [auth LA] MOL2 format, chain NC [auth NA] MOL2 format, chain OC [auth OA] MOL2 format, chain OG [auth AC] MOL2 format, chain PG [auth DC] MOL2 format, chain QG [auth FC] mmCIF format, chain JC [auth FA] mmCIF format, chain LC [auth IA] mmCIF format, chain MC [auth LA] mmCIF format, chain NC [auth NA] mmCIF format, chain OC [auth OA] mmCIF format, chain OG [auth AC] mmCIF format, chain PG [auth DC] mmCIF format, chain QG [auth FC]	JC [auth FA] LC [auth IA] MC [auth LA] NC [auth NA] OC [auth OA] JC [auth FA], LC [auth IA], MC [auth LA], NC [auth NA], OC [auth OA], OG [auth AC], PG [auth DC], QG [auth FC]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Interactions Focus chain JC [auth FA] Focus chain LC [auth IA] Focus chain MC [auth LA] Focus chain NC [auth NA] Focus chain OC [auth OA] Focus chain OG [auth AC] Focus chain PG [auth DC] Focus chain QG [auth FC] Interactions & Density Focus chain JC [auth FA] Focus chain LC [auth IA] Focus chain MC [auth LA] Focus chain NC [auth NA] Focus chain OC [auth OA] Focus chain OG [auth AC] Focus chain PG [auth DC] Focus chain QG [auth FC]
MG Query on MG Download:Ideal Coordinates CCD File SDF format, chain AD [auth WA] SDF format, chain AE [auth WA] SDF format, chain AF [auth WA] SDF format, chain AG [auth ZA] SDF format, chain BD [auth WA] SDF format, chain BE [auth WA] SDF format, chain BF [auth WA] SDF format, chain BG [auth ZA] SDF format, chain CD [auth WA] SDF format, chain CE [auth WA] SDF format, chain CF [auth WA] SDF format, chain CG [auth ZA] SDF format, chain DD [auth WA] SDF format, chain DE [auth WA] SDF format, chain DF [auth WA] SDF format, chain DG [auth ZA] SDF format, chain ED [auth WA] SDF format, chain EE [auth WA] SDF format, chain EF [auth WA] SDF format, chain EG [auth ZA] SDF format, chain FD [auth WA] SDF format, chain FE [auth WA] SDF format, chain FF [auth WA] SDF format, chain FG [auth ZA] SDF format, chain GD [auth WA] SDF format, chain GE [auth WA] SDF format, chain GF [auth WA] SDF format, chain GG [auth ZA] SDF format, chain HD [auth WA] SDF format, chain HE [auth WA] SDF format, chain HF [auth WA] SDF format, chain HG [auth ZA] SDF format, chain IC [auth I] SDF format, chain ID [auth WA] SDF format, chain IE [auth WA] SDF format, chain IF [auth WA] SDF format, chain IG [auth ZA] SDF format, chain JD [auth WA] SDF format, chain JE [auth WA] SDF format, chain JF [auth WA] SDF format, chain JG [auth ZA] SDF format, chain KC [auth FA] SDF format, chain KD [auth WA] SDF format, chain KE [auth WA] SDF format, chain KF [auth WA] SDF format, chain KG [auth ZA] SDF format, chain LD [auth WA] SDF format, chain LE [auth WA] SDF format, chain LF [auth WA] SDF format, chain LG [auth ZA] SDF format, chain MD [auth WA] SDF format, chain ME [auth WA] SDF format, chain MF [auth WA] SDF format, chain ND [auth WA] SDF format, chain NE [auth WA] SDF format, chain NF [auth WA] SDF format, chain NG [auth AC] SDF format, chain OD [auth WA] SDF format, chain OE [auth WA] SDF format, chain PC [auth WA] SDF format, chain PD [auth WA] SDF format, chain PE [auth WA] SDF format, chain QC [auth WA] SDF format, chain QD [auth WA] SDF format, chain QE [auth WA] SDF format, chain QF [auth WA] SDF format, chain RC [auth WA] SDF format, chain RD [auth WA] SDF format, chain RE [auth WA] SDF format, chain RF [auth WA] SDF format, chain SC [auth WA] SDF format, chain SD [auth WA] SDF format, chain SE [auth WA] SDF format, chain SF [auth WA] SDF format, chain TC [auth WA] SDF format, chain TD [auth WA] SDF format, chain TE [auth WA] SDF format, chain TF [auth XA] SDF format, chain UC [auth WA] SDF format, chain UD [auth WA] SDF format, chain UE [auth WA] SDF format, chain UF [auth ZA] SDF format, chain VC [auth WA] SDF format, chain VD [auth WA] SDF format, chain VE [auth WA] SDF format, chain VF [auth ZA] SDF format, chain WC [auth WA] SDF format, chain WD [auth WA] SDF format, chain WE [auth WA] SDF format, chain WF [auth ZA] SDF format, chain XC [auth WA] SDF format, chain XD [auth WA] SDF format, chain XE [auth WA] SDF format, chain XF [auth ZA] SDF format, chain YC [auth WA] SDF format, chain YD [auth WA] SDF format, chain YE [auth WA] SDF format, chain YF [auth ZA] SDF format, chain ZC [auth WA] SDF format, chain ZD [auth WA] SDF format, chain ZE [auth WA] SDF format, chain ZF [auth ZA] MOL2 format, chain AD [auth WA] MOL2 format, chain AE [auth WA] MOL2 format, chain AF [auth WA] MOL2 format, chain AG [auth ZA] MOL2 format, chain BD [auth WA] MOL2 format, chain BE [auth WA] MOL2 format, chain BF [auth WA] MOL2 format, chain BG [auth ZA] MOL2 format, chain CD [auth WA] MOL2 format, chain CE [auth WA] MOL2 format, chain CF [auth WA] MOL2 format, chain CG [auth ZA] MOL2 format, chain DD [auth WA] MOL2 format, chain DE [auth WA] MOL2 format, chain DF [auth WA] MOL2 format, chain DG [auth ZA] MOL2 format, chain ED [auth WA] MOL2 format, chain EE [auth WA] MOL2 format, chain EF [auth WA] MOL2 format, chain EG [auth ZA] MOL2 format, chain FD [auth WA] MOL2 format, chain FE [auth WA] MOL2 format, chain FF [auth WA] MOL2 format, chain FG [auth ZA] MOL2 format, chain GD [auth WA] MOL2 format, chain GE [auth WA] MOL2 format, chain GF [auth WA] MOL2 format, chain GG [auth ZA] MOL2 format, chain HD [auth WA] MOL2 format, chain HE [auth WA] MOL2 format, chain HF [auth WA] MOL2 format, chain HG [auth ZA] MOL2 format, chain IC [auth I] MOL2 format, chain ID [auth WA] MOL2 format, chain IE [auth WA] MOL2 format, chain IF [auth WA] MOL2 format, chain IG [auth ZA] MOL2 format, chain JD [auth WA] MOL2 format, chain JE [auth WA] MOL2 format, chain JF [auth WA] MOL2 format, chain JG [auth ZA] MOL2 format, chain KC [auth FA] MOL2 format, chain KD [auth WA] MOL2 format, chain KE [auth WA] MOL2 format, chain KF [auth WA] MOL2 format, chain KG [auth ZA] MOL2 format, chain LD [auth WA] MOL2 format, chain LE [auth WA] MOL2 format, chain LF [auth WA] MOL2 format, chain LG [auth ZA] MOL2 format, chain MD [auth WA] MOL2 format, chain ME [auth WA] MOL2 format, chain MF [auth WA] MOL2 format, chain ND [auth WA] MOL2 format, chain NE [auth WA] MOL2 format, chain NF [auth WA] MOL2 format, chain NG [auth AC] MOL2 format, chain OD [auth WA] MOL2 format, chain OE [auth WA] MOL2 format, chain PC [auth WA] MOL2 format, chain PD [auth WA] MOL2 format, chain PE [auth WA] MOL2 format, chain QC [auth WA] MOL2 format, chain QD [auth WA] MOL2 format, chain QE [auth WA] MOL2 format, chain QF [auth WA] MOL2 format, chain RC [auth WA] MOL2 format, chain RD [auth WA] MOL2 format, chain RE [auth WA] MOL2 format, chain RF [auth WA] MOL2 format, chain SC [auth WA] MOL2 format, chain SD [auth WA] MOL2 format, chain SE [auth WA] MOL2 format, chain SF [auth WA] MOL2 format, chain TC [auth WA] MOL2 format, chain TD [auth WA] MOL2 format, chain TE [auth WA] MOL2 format, chain TF [auth XA] MOL2 format, chain UC [auth WA] MOL2 format, chain UD [auth WA] MOL2 format, chain UE [auth WA] MOL2 format, chain UF [auth ZA] MOL2 format, chain VC [auth WA] MOL2 format, chain VD [auth WA] MOL2 format, chain VE [auth WA] MOL2 format, chain VF [auth ZA] MOL2 format, chain WC [auth WA] MOL2 format, chain WD [auth WA] MOL2 format, chain WE [auth WA] MOL2 format, chain WF [auth ZA] MOL2 format, chain XC [auth WA] MOL2 format, chain XD [auth WA] MOL2 format, chain XE [auth WA] MOL2 format, chain XF [auth ZA] MOL2 format, chain YC [auth WA] MOL2 format, chain YD [auth WA] MOL2 format, chain YE [auth WA] MOL2 format, chain YF [auth ZA] MOL2 format, chain ZC [auth WA] MOL2 format, chain ZD [auth WA] MOL2 format, chain ZE [auth WA] MOL2 format, chain ZF [auth ZA] mmCIF format, chain AD [auth WA] mmCIF format, chain AE [auth WA] mmCIF format, chain AF [auth WA] mmCIF format, chain AG [auth ZA] mmCIF format, chain BD [auth WA] mmCIF format, chain BE [auth WA] mmCIF format, chain BF [auth WA] mmCIF format, chain BG [auth ZA] mmCIF format, chain CD [auth WA] mmCIF format, chain CE [auth WA] mmCIF format, chain CF [auth WA] mmCIF format, chain CG [auth ZA] mmCIF format, chain DD [auth WA] mmCIF format, chain DE [auth WA] mmCIF format, chain DF [auth WA] mmCIF format, chain DG [auth ZA] mmCIF format, chain ED [auth WA] mmCIF format, chain EE [auth WA] mmCIF format, chain EF [auth WA] mmCIF format, chain EG [auth ZA] mmCIF format, chain FD [auth WA] mmCIF format, chain FE [auth WA] mmCIF format, chain FF [auth WA] mmCIF format, chain FG [auth ZA] mmCIF format, chain GD [auth WA] mmCIF format, chain GE [auth WA] mmCIF format, chain GF [auth WA] mmCIF format, chain GG [auth ZA] mmCIF format, chain HD [auth WA] mmCIF format, chain HE [auth WA] mmCIF format, chain HF [auth WA] mmCIF format, chain HG [auth ZA] mmCIF format, chain IC [auth I] mmCIF format, chain ID [auth WA] mmCIF format, chain IE [auth WA] mmCIF format, chain IF [auth WA] mmCIF format, chain IG [auth ZA] mmCIF format, chain JD [auth WA] mmCIF format, chain JE [auth WA] mmCIF format, chain JF [auth WA] mmCIF format, chain JG [auth ZA] mmCIF format, chain KC [auth FA] mmCIF format, chain KD [auth WA] mmCIF format, chain KE [auth WA] mmCIF format, chain KF [auth WA] mmCIF format, chain KG [auth ZA] mmCIF format, chain LD [auth WA] mmCIF format, chain LE [auth WA] mmCIF format, chain LF [auth WA] mmCIF format, chain LG [auth ZA] mmCIF format, chain MD [auth WA] mmCIF format, chain ME [auth WA] mmCIF format, chain MF [auth WA] mmCIF format, chain ND [auth WA] mmCIF format, chain NE [auth WA] mmCIF format, chain NF [auth WA] mmCIF format, chain NG [auth AC] mmCIF format, chain OD [auth WA] mmCIF format, chain OE [auth WA] mmCIF format, chain PC [auth WA] mmCIF format, chain PD [auth WA] mmCIF format, chain PE [auth WA] mmCIF format, chain QC [auth WA] mmCIF format, chain QD [auth WA] mmCIF format, chain QE [auth WA] mmCIF format, chain QF [auth WA] mmCIF format, chain RC [auth WA] mmCIF format, chain RD [auth WA] mmCIF format, chain RE [auth WA] mmCIF format, chain RF [auth WA] mmCIF format, chain SC [auth WA] mmCIF format, chain SD [auth WA] mmCIF format, chain SE [auth WA] mmCIF format, chain SF [auth WA] mmCIF format, chain TC [auth WA] mmCIF format, chain TD [auth WA] mmCIF format, chain TE [auth WA] mmCIF format, chain TF [auth XA] mmCIF format, chain UC [auth WA] mmCIF format, chain UD [auth WA] mmCIF format, chain UE [auth WA] mmCIF format, chain UF [auth ZA] mmCIF format, chain VC [auth WA] mmCIF format, chain VD [auth WA] mmCIF format, chain VE [auth WA] mmCIF format, chain VF [auth ZA] mmCIF format, chain WC [auth WA] mmCIF format, chain WD [auth WA] mmCIF format, chain WE [auth WA] mmCIF format, chain WF [auth ZA] mmCIF format, chain XC [auth WA] mmCIF format, chain XD [auth WA] mmCIF format, chain XE [auth WA] mmCIF format, chain XF [auth ZA] mmCIF format, chain YC [auth WA] mmCIF format, chain YD [auth WA] mmCIF format, chain YE [auth WA] mmCIF format, chain YF [auth ZA] mmCIF format, chain ZC [auth WA] mmCIF format, chain ZD [auth WA] mmCIF format, chain ZE [auth WA] mmCIF format, chain ZF [auth ZA]	AD [auth WA] AE [auth WA] AF [auth WA] AG [auth ZA] BD [auth WA] AD [auth WA], AE [auth WA], AF [auth WA], AG [auth ZA], BD [auth WA], BE [auth WA], BF [auth WA], BG [auth ZA], CD [auth WA], CE [auth WA], CF [auth WA], CG [auth ZA], DD [auth WA], DE [auth WA], DF [auth WA], DG [auth ZA], ED [auth WA], EE [auth WA], EF [auth WA], EG [auth ZA], FD [auth WA], FE [auth WA], FF [auth WA], FG [auth ZA], GD [auth WA], GE [auth WA], GF [auth WA], GG [auth ZA], HD [auth WA], HE [auth WA], HF [auth WA], HG [auth ZA], IC [auth I], ID [auth WA], IE [auth WA], IF [auth WA], IG [auth ZA], JD [auth WA], JE [auth WA], JF [auth WA], JG [auth ZA], KC [auth FA], KD [auth WA], KE [auth WA], KF [auth WA], KG [auth ZA], LD [auth WA], LE [auth WA], LF [auth WA], LG [auth ZA], MD [auth WA], ME [auth WA], MF [auth WA], ND [auth WA], NE [auth WA], NF [auth WA], NG [auth AC], OD [auth WA], OE [auth WA], PC [auth WA], PD [auth WA], PE [auth WA], QC [auth WA], QD [auth WA], QE [auth WA], QF [auth WA], RC [auth WA], RD [auth WA], RE [auth WA], RF [auth WA], SC [auth WA], SD [auth WA], SE [auth WA], SF [auth WA], TC [auth WA], TD [auth WA], TE [auth WA], TF [auth XA], UC [auth WA], UD [auth WA], UE [auth WA], UF [auth ZA], VC [auth WA], VD [auth WA], VE [auth WA], VF [auth ZA], WC [auth WA], WD [auth WA], WE [auth WA], WF [auth ZA], XC [auth WA], XD [auth WA], XE [auth WA], XF [auth ZA], YC [auth WA], YD [auth WA], YE [auth WA], YF [auth ZA], ZC [auth WA], ZD [auth WA], ZE [auth WA], ZF [auth ZA]	MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N		Interactions Focus chain AD [auth WA] Focus chain AE [auth WA] Focus chain AF [auth WA] Focus chain AG [auth ZA] Focus chain BD [auth WA] Focus chain BE [auth WA] Focus chain BF [auth WA] Focus chain BG [auth ZA] Focus chain CD [auth WA] Focus chain CE [auth WA] Focus chain CF [auth WA] Focus chain CG [auth ZA] Focus chain DD [auth WA] Focus chain DE [auth WA] Focus chain DF [auth WA] Focus chain DG [auth ZA] Focus chain ED [auth WA] Focus chain EE [auth WA] Focus chain EF [auth WA] Focus chain EG [auth ZA] Focus chain FD [auth WA] Focus chain FE [auth WA] Focus chain FF [auth WA] Focus chain FG [auth ZA] Focus chain GD [auth WA] Focus chain GE [auth WA] Focus chain GF [auth WA] Focus chain GG [auth ZA] Focus chain HD [auth WA] Focus chain HE [auth WA] Focus chain HF [auth WA] Focus chain HG [auth ZA] Focus chain IC [auth I] Focus chain ID [auth WA] Focus chain IE [auth WA] Focus chain IF [auth WA] Focus chain IG [auth ZA] Focus chain JD [auth WA] Focus chain JE [auth WA] Focus chain JF [auth WA] Focus chain JG [auth ZA] Focus chain KC [auth FA] Focus chain KD [auth WA] Focus chain KE [auth WA] Focus chain KF [auth WA] Focus chain KG [auth ZA] Focus chain LD [auth WA] Focus chain LE [auth WA] Focus chain LF [auth WA] Focus chain LG [auth ZA] Focus chain MD [auth WA] Focus chain ME [auth WA] Focus chain MF [auth WA] Focus chain ND [auth WA] Focus chain NE [auth WA] Focus chain NF [auth WA] Focus chain NG [auth AC] Focus chain OD [auth WA] Focus chain OE [auth WA] Focus chain PC [auth WA] Focus chain PD [auth WA] Focus chain PE [auth WA] Focus chain QC [auth WA] Focus chain QD [auth WA] Focus chain QE [auth WA] Focus chain QF [auth WA] Focus chain RC [auth WA] Focus chain RD [auth WA] Focus chain RE [auth WA] Focus chain RF [auth WA] Focus chain SC [auth WA] Focus chain SD [auth WA] Focus chain SE [auth WA] Focus chain SF [auth WA] Focus chain TC [auth WA] Focus chain TD [auth WA] Focus chain TE [auth WA] Focus chain TF [auth XA] Focus chain UC [auth WA] Focus chain UD [auth WA] Focus chain UE [auth WA] Focus chain UF [auth ZA] Focus chain VC [auth WA] Focus chain VD [auth WA] Focus chain VE [auth WA] Focus chain VF [auth ZA] Focus chain WC [auth WA] Focus chain WD [auth WA] Focus chain WE [auth WA] Focus chain WF [auth ZA] Focus chain XC [auth WA] Focus chain XD [auth WA] Focus chain XE [auth WA] Focus chain XF [auth ZA] Focus chain YC [auth WA] Focus chain YD [auth WA] Focus chain YE [auth WA] Focus chain YF [auth ZA] Focus chain ZC [auth WA] Focus chain ZD [auth WA] Focus chain ZE [auth WA] Focus chain ZF [auth ZA] Interactions & Density Focus chain AD [auth WA] Focus chain AE [auth WA] Focus chain AF [auth WA] Focus chain AG [auth ZA] Focus chain BD [auth WA] Focus chain BE [auth WA] Focus chain BF [auth WA] Focus chain BG [auth ZA] Focus chain CD [auth WA] Focus chain CE [auth WA] Focus chain CF [auth WA] Focus chain CG [auth ZA] Focus chain DD [auth WA] Focus chain DE [auth WA] Focus chain DF [auth WA] Focus chain DG [auth ZA] Focus chain ED [auth WA] Focus chain EE [auth WA] Focus chain EF [auth WA] Focus chain EG [auth ZA] Focus chain FD [auth WA] Focus chain FE [auth WA] Focus chain FF [auth WA] Focus chain FG [auth ZA] Focus chain GD [auth WA] Focus chain GE [auth WA] Focus chain GF [auth WA] Focus chain GG [auth ZA] Focus chain HD [auth WA] Focus chain HE [auth WA] Focus chain HF [auth WA] Focus chain HG [auth ZA] Focus chain IC [auth I] Focus chain ID [auth WA] Focus chain IE [auth WA] Focus chain IF [auth WA] Focus chain IG [auth ZA] Focus chain JD [auth WA] Focus chain JE [auth WA] Focus chain JF [auth WA] Focus chain JG [auth ZA] Focus chain KC [auth FA] Focus chain KD [auth WA] Focus chain KE [auth WA] Focus chain KF [auth WA] Focus chain KG [auth ZA] Focus chain LD [auth WA] Focus chain LE [auth WA] Focus chain LF [auth WA] Focus chain LG [auth ZA] Focus chain MD [auth WA] Focus chain ME [auth WA] Focus chain MF [auth WA] Focus chain ND [auth WA] Focus chain NE [auth WA] Focus chain NF [auth WA] Focus chain NG [auth AC] Focus chain OD [auth WA] Focus chain OE [auth WA] Focus chain PC [auth WA] Focus chain PD [auth WA] Focus chain PE [auth WA] Focus chain QC [auth WA] Focus chain QD [auth WA] Focus chain QE [auth WA] Focus chain QF [auth WA] Focus chain RC [auth WA] Focus chain RD [auth WA] Focus chain RE [auth WA] Focus chain RF [auth WA] Focus chain SC [auth WA] Focus chain SD [auth WA] Focus chain SE [auth WA] Focus chain SF [auth WA] Focus chain TC [auth WA] Focus chain TD [auth WA] Focus chain TE [auth WA] Focus chain TF [auth XA] Focus chain UC [auth WA] Focus chain UD [auth WA] Focus chain UE [auth WA] Focus chain UF [auth ZA] Focus chain VC [auth WA] Focus chain VD [auth WA] Focus chain VE [auth WA] Focus chain VF [auth ZA] Focus chain WC [auth WA] Focus chain WD [auth WA] Focus chain WE [auth WA] Focus chain WF [auth ZA] Focus chain XC [auth WA] Focus chain XD [auth WA] Focus chain XE [auth WA] Focus chain XF [auth ZA] Focus chain YC [auth WA] Focus chain YD [auth WA] Focus chain YE [auth WA] Focus chain YF [auth ZA] Focus chain ZC [auth WA] Focus chain ZD [auth WA] Focus chain ZE [auth WA] Focus chain ZF [auth ZA]

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.80 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

EM Software:

Task	Software Package	Version
MODEL REFINEMENT	PHENIX	1.21rc1_5127
RECONSTRUCTION	cisTEM

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2025-07-30

Deposition Author(s):

Funding Organization	Location	Grant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)	United States	GM146862

Revision History (Full details and data files)

Version 1.0: 2025-07-30
Type: Initial release

8VVU | pdb_00008vvu

Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA

Literature

Rapid purification reveals structural insights into transient ribosome states

Biological Assembly 1

Macromolecules

Entity ID: 1

UniProt

Entity Groups

Sequence Annotations

Entity ID: 2

UniProt

Entity Groups

Sequence Annotations

Entity ID: 3

UniProt

Entity Groups

Sequence Annotations

Entity ID: 4

UniProt

Entity Groups

Sequence Annotations

Entity ID: 5

UniProt

Entity Groups

Sequence Annotations

Entity ID: 6

UniProt

Entity Groups

Sequence Annotations

Entity ID: 7

UniProt

Entity Groups

Sequence Annotations

Entity ID: 8

UniProt

Entity Groups

Sequence Annotations

Entity ID: 9

UniProt

Entity Groups

Sequence Annotations

Entity ID: 10

UniProt

Entity Groups

Sequence Annotations

Entity ID: 11

UniProt

Entity Groups

Sequence Annotations

Entity ID: 12

UniProt

Entity Groups

Sequence Annotations

Entity ID: 13

UniProt

Entity Groups

Sequence Annotations

Entity ID: 14

Entity ID: 15

UniProt

Entity Groups

Sequence Annotations

Entity ID: 16

UniProt

Entity Groups

Sequence Annotations

Entity ID: 17

Entity ID: 18

Entity ID: 19

UniProt

Entity Groups

Sequence Annotations

Entity ID: 20

UniProt

Entity Groups

Sequence Annotations

Entity ID: 21

UniProt

Entity Groups