KLHDC2 ubiquitin ligase in complex with a novel small-molecule
Rusnac, D.V., Zhou, G., Canzani, D., Bush, M.F., DiMaio, F., Zheng, N.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Kelch domain-containing protein 2 | 341 | Homo sapiens | Mutation(s): 0  Gene Names: KLHDC2 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9Y2U9 (Homo sapiens) Explore Q9Y2U9  Go to UniProtKB:  Q9Y2U9 | |||||
GTEx:  ENSG00000165516  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9Y2U9 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
XU8 (Subject of Investigation/LOI) Query on XU8 | C [auth A], D [auth B] | {4-[(2-{[(4-tert-butylphenyl)methyl]sulfanyl}acetamido)methyl]-1H-1,2,3-triazol-1-yl}acetic acid C18 H24 N4 O3 S HCTZVVOCYIXIAH-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 44.381 | α = 90 |
b = 88.165 | β = 104.39 |
c = 88.512 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
DIALS | data scaling |
PHENIX | phasing |
Coot | model building |
Funding Organization | Location | Grant Number |
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Howard Hughes Medical Institute (HHMI) | United States | -- |