Structural basis for ryanodine receptor type 2 leak in heart failure and arrhythmogenic disorders
Miotto, M.C.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Calmodulin-1 | A [auth I], G [auth J], H [auth L], I [auth K] | 149 | Homo sapiens | Mutation(s): 0  Gene Names: CALM1, CALM, CAM, CAM1 | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P0DP23 (Homo sapiens) Explore P0DP23  Go to UniProtKB:  P0DP23 | |||||
PHAROS:  P0DP23 GTEx:  ENSG00000198668  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0DP23 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Ryanodine receptor 2 | B [auth A], J [auth B], K [auth C], L [auth D] | 4,967 | Homo sapiens | Mutation(s): 1  Gene Names: RYR2 | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q92736 (Homo sapiens) Explore Q92736  Go to UniProtKB:  Q92736 | |||||
PHAROS:  Q92736 GTEx:  ENSG00000198626  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q92736 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Peptidyl-prolyl cis-trans isomerase FKBP1B | C [auth E], D [auth F], E [auth G], F [auth H] | 108 | Homo sapiens | Mutation(s): 0  Gene Names: FKBP1B, FKBP12.6, FKBP1L, FKBP9, OTK4 EC: 5.2.1.8 | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P68106 (Homo sapiens) Explore P68106  Go to UniProtKB:  P68106 | |||||
PHAROS:  P68106 GTEx:  ENSG00000119782  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P68106 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ATP (Subject of Investigation/LOI) Query on ATP | HA [auth B] JA [auth B] LA [auth C] NA [auth C] PA [auth D] | ADENOSINE-5'-TRIPHOSPHATE C10 H16 N5 O13 P3 ZKHQWZAMYRWXGA-KQYNXXCUSA-N | |||
ZN (Subject of Investigation/LOI) Query on ZN | GA [auth B], KA [auth C], OA [auth D], Q [auth A] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N | |||
CA (Subject of Investigation/LOI) Query on CA | AA [auth L] BA [auth L] CA [auth K] DA [auth K] EA [auth K] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Task | Software Package | Version |
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MODEL REFINEMENT | PHENIX | |
RECONSTRUCTION | cryoSPARC |
Funding Organization | Location | Grant Number |
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National Institutes of Health/National Heart, Lung, and Blood Institute (NIH/NHLBI) | United States | R01HL145473 |