Cryo-EM structure of the yeast Spo11 core complex bound to DNA
Yu, Y., Wang, J.C., Liu, K.X., Zheng, Z., Patel, D.J., Keeney, S.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Meiotic recombination protein REC104 | A [auth F] | 182 | Saccharomyces cerevisiae S288C | Mutation(s): 0  Gene Names: REC104, YHR157W | ![]() |
UniProt | |||||
Find proteins for P33323 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore P33323  Go to UniProtKB:  P33323 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P33323 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Meiotic recombination protein REC102 | 264 | Saccharomyces cerevisiae S288C | Mutation(s): 0  Gene Names: REC102, YLR329W, L8543.17 | ![]() | |
UniProt | |||||
Find proteins for Q02721 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore Q02721  Go to UniProtKB:  Q02721 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q02721 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 3 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Meiosis-specific protein SPO11 | C [auth A] | 435 | Saccharomyces cerevisiae S288C | Mutation(s): 0  Gene Names: SPO11 | ![]() |
UniProt | |||||
Find proteins for P23179 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore P23179  Go to UniProtKB:  P23179 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P23179 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 4 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Antiviral protein SKI8 | D [auth C] | 397 | Saccharomyces cerevisiae S288C | Mutation(s): 0  Gene Names: SKI8 | ![]() |
UniProt | |||||
Find proteins for Q02793 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore Q02793  Go to UniProtKB:  Q02793 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q02793 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 5 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | Organism | Image | |
gapped DNA | E [auth D] | 71 | Saccharomyces cerevisiae S288C | ![]() | |
Sequence AnnotationsExpand | |||||
|
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
MG (Subject of Investigation/LOI) Query on MG | F [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/Eunice Kennedy Shriver National Institute of Child Health & Human Development (NIH/NICHD) | United States | R01 HD110120 |