8U86

Structural Basis of Human NOX5 Activation

PDB DOI: https://doi.org/10.2210/pdb8U86/pdb
EM Map EMD-42015: EMDB EMDataResource

Classification: MEMBRANE PROTEIN
Organism(s): Homo sapiens
Expression System: Homo sapiens
Mutation(s): No
Membrane Protein: Yes PDBTM

Deposited: 2023-09-15 Released: 2024-05-01
Deposition Author(s): Cui, C., Jiang, M., Sun, J.
Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.30 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Structural Basis of Human NOX5 Activation

Cui, C., Jiang, M., Sun, J.

To be published.

Macromolecule Content

Total Structure Weight: 170.46 kDa
Atom Count: 7,623
Modelled Residue Count: 892
Deposited Residue Count: 1,438
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
NADPH oxidase 5	A, B [auth C]	719	Homo sapiens	Mutation(s): 0 Gene Names: NOX5 EC: 1.6.3 Membrane Entity: Yes
UniProt & NIH Common Fund Data Resources
Find proteins for Q96PH1 (Homo sapiens) Explore Q96PH1 Go to UniProtKB: Q96PH1
PHAROS: Q96PH1 GTEx: ENSG00000255346
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q96PH1
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 6 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
FAD (Subject of Investigation/LOI) Query on FAD Download Ideal Coordinates CCD File SDF format, chain F [auth A] SDF format, chain M [auth C] MOL2 format, chain F [auth A] MOL2 format, chain M [auth C] mmCIF format, chain F [auth A] mmCIF format, chain M [auth C]	F [auth A], M [auth C]	FLAVIN-ADENINE DINUCLEOTIDE C₂₇ H₃₃ N₉ O₁₅ P₂ VWWQXMAJTJZDQX-UYBVJOGSSA-N		Interactions Focus chain F [auth A] Focus chain M [auth C] Interactions & Density Focus chain F [auth A] Focus chain M [auth C]
NDP (Subject of Investigation/LOI) Query on NDP Download Ideal Coordinates CCD File SDF format, chain E [auth A] SDF format, chain L [auth C] MOL2 format, chain E [auth A] MOL2 format, chain L [auth C] mmCIF format, chain E [auth A] mmCIF format, chain L [auth C]	E [auth A], L [auth C]	NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE C₂₁ H₃₀ N₇ O₁₇ P₃ ACFIXJIJDZMPPO-NNYOXOHSSA-N		Interactions Focus chain E [auth A] Focus chain L [auth C] Interactions & Density Focus chain E [auth A] Focus chain L [auth C]
HEB (Subject of Investigation/LOI) Query on HEB Download Ideal Coordinates CCD File SDF format, chain C [auth A] SDF format, chain D [auth A] SDF format, chain J [auth C] SDF format, chain K [auth C] MOL2 format, chain C [auth A] MOL2 format, chain D [auth A] MOL2 format, chain J [auth C] MOL2 format, chain K [auth C] mmCIF format, chain C [auth A] mmCIF format, chain D [auth A] mmCIF format, chain J [auth C] mmCIF format, chain K [auth C]	C [auth A], D [auth A], J [auth C], K [auth C]	HEME B/C C₃₄ H₃₄ Fe N₄ O₄ NEGHHAJBRZGUAY-RGGAHWMASA-L		Interactions Focus chain C [auth A] Focus chain D [auth A] Focus chain J [auth C] Focus chain K [auth C] Interactions & Density Focus chain C [auth A] Focus chain D [auth A] Focus chain J [auth C] Focus chain K [auth C]
D12 Query on D12 Download Ideal Coordinates CCD File SDF format, chain G [auth A] SDF format, chain N [auth C] MOL2 format, chain G [auth A] MOL2 format, chain N [auth C] mmCIF format, chain G [auth A] mmCIF format, chain N [auth C]	G [auth A], N [auth C]	DODECANE C₁₂ H₂₆ SNRUBQQJIBEYMU-UHFFFAOYSA-N		Interactions Focus chain G [auth A] Focus chain N [auth C] Interactions & Density Focus chain G [auth A] Focus chain N [auth C]
D10 Query on D10 Download Ideal Coordinates CCD File SDF format, chain H [auth A] SDF format, chain O [auth C] MOL2 format, chain H [auth A] MOL2 format, chain O [auth C] mmCIF format, chain H [auth A] mmCIF format, chain O [auth C]	H [auth A], O [auth C]	DECANE C₁₀ H₂₂ DIOQZVSQGTUSAI-UHFFFAOYSA-N		Interactions Focus chain H [auth A] Focus chain O [auth C] Interactions & Density Focus chain H [auth A] Focus chain O [auth C]
ZN Query on ZN Download Ideal Coordinates CCD File SDF format, chain I [auth A] MOL2 format, chain I [auth A] mmCIF format, chain I [auth A]	I [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Interactions Focus chain I [auth A] Interactions & Density Focus chain I [auth A]