Plasmodium vivax PMX-XX inhibitor complex
Hodder, A.N., Cowman, A.F., Scally, S.W.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Plasmepsin V | 461 | Plasmodium vivax Sal-1 | Mutation(s): 0  Gene Names: PMV, PVX_116695 EC: 3.4.23 | ||
UniProt | |||||
Find proteins for A5K302 (Plasmodium vivax (strain Salvador I)) Explore A5K302  Go to UniProtKB:  A5K302 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A5K302 | ||||
Glycosylation | |||||
Glycosylation Sites: 2 | |||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
T0F (Subject of Investigation/LOI) Query on T0F | D [auth A] | (2E,4aR,7aS)-6-[(3M)-3-(2-chlorophenyl)pyridin-2-yl]-7a-(2,5-difluorophenyl)-2-imino-3-methyloctahydro-4H-pyrrolo[3,4-d]pyrimidin-4-one C24 H20 Cl F2 N5 O FCCKGIKLSVNPII-MHECFPHRSA-N | |||
NAG Query on NAG | B [auth A], C [auth A] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N | |||
EDO Query on EDO | E [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 60.72 | α = 90 |
b = 81.85 | β = 90 |
c = 192.876 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
XDS | data reduction |
XDS | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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Wellcome Trust | United Kingdom | -- |