8TUZ

Fab 857-2 in complex with OspA

PDB DOI: https://doi.org/10.2210/pdb8TUZ/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo sapiens, Borreliella burgdorferi
Expression System: Cricetulus griseus, Escherichia coli B
Mutation(s): No

Deposited: 2023-08-17 Released: 2024-08-28
Deposition Author(s): Rudolph, M.J., Mantis, N.
Funding Organization(s): National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.19 Å
R-Value Free: 0.239
R-Value Work: 0.177
R-Value Observed: 0.180

Starting Models: experimental
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wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Fab 857-2 in complex with OspA

Rudolph, M.J., Mantis, N.

To be published.

Macromolecule Content

Total Structure Weight: 74.97 kDa
Atom Count: 5,536
Modelled Residue Count: 684
Deposited Residue Count: 687
Unique protein chains: 3

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Heavy chain of human monoclonal antibody 857-2	A [auth H]	223	Homo sapiens	Mutation(s): 0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations Expand
Reference Sequence

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(by identity cutoff) | 3D Structure

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Light chain of human monoclonal antibody 857-2	B [auth L]	213	Homo sapiens	Mutation(s): 0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
Outer surface protein A	C [auth A]	251	Borreliella burgdorferi	Mutation(s): 0 Gene Names: ospA
UniProt
Find proteins for Q45040 (Borreliella burgdorferi) Explore Q45040 Go to UniProtKB: Q45040
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q45040
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
EDO Query on EDO Download Ideal Coordinates CCD File SDF format, chain D [auth H] SDF format, chain E [auth H] SDF format, chain J [auth L] SDF format, chain L [auth A] SDF format, chain M [auth A] SDF format, chain N [auth A] MOL2 format, chain D [auth H] MOL2 format, chain E [auth H] MOL2 format, chain J [auth L] MOL2 format, chain L [auth A] MOL2 format, chain M [auth A] MOL2 format, chain N [auth A] mmCIF format, chain D [auth H] mmCIF format, chain E [auth H] mmCIF format, chain J [auth L] mmCIF format, chain L [auth A] mmCIF format, chain M [auth A] mmCIF format, chain N [auth A]	D [auth H] E [auth H] J [auth L] L [auth A] M [auth A] D [auth H], E [auth H], J [auth L], L [auth A], M [auth A], N [auth A]	1,2-ETHANEDIOL C₂ H₆ O₂ LYCAIKOWRPUZTN-UHFFFAOYSA-N		Interactions Focus chain D [auth H] Focus chain E [auth H] Focus chain J [auth L] Focus chain L [auth A] Focus chain M [auth A] Focus chain N [auth A]
CL Query on CL Download Ideal Coordinates CCD File SDF format, chain F [auth H] SDF format, chain G [auth H] SDF format, chain H SDF format, chain I [auth H] SDF format, chain K [auth L] SDF format, chain O [auth A] SDF format, chain P [auth A] MOL2 format, chain F [auth H] MOL2 format, chain G [auth H] MOL2 format, chain H MOL2 format, chain I [auth H] MOL2 format, chain K [auth L] MOL2 format, chain O [auth A] MOL2 format, chain P [auth A] mmCIF format, chain F [auth H] mmCIF format, chain G [auth H] mmCIF format, chain H mmCIF format, chain I [auth H] mmCIF format, chain K [auth L] mmCIF format, chain O [auth A] mmCIF format, chain P [auth A]	F [auth H] G [auth H] H I [auth H] K [auth L] F [auth H], G [auth H], H, I [auth H], K [auth L], O [auth A], P [auth A]	CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M		Interactions Focus chain F [auth H] Focus chain G [auth H] Focus chain H Focus chain I [auth H] Focus chain K [auth L] Focus chain O [auth A] Focus chain P [auth A]