Structure of a HEPES bound TRAP transporter substrate binding protein.
Newton-Vesty, M.C., Dobson, R.C.J.To be published.
Experimental Data Snapshot
Starting Model: in silico
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Isethionate-binding periplasmic protein DctP | 336 | Oleidesulfovibrio alaskensis G20 | Mutation(s): 0  Gene Names: dctP, Dde_1275 | ||
UniProt | |||||
Find proteins for Q312S0 (Oleidesulfovibrio alaskensis (strain ATCC BAA-1058 / DSM 17464 / G20)) Explore Q312S0  Go to UniProtKB:  Q312S0 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q312S0 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
EPE Query on EPE | B [auth A] | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID C8 H18 N2 O4 S JKMHFZQWWAIEOD-UHFFFAOYSA-N | |||
EDO Query on EDO | C [auth A], D [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 45.588 | α = 90 |
b = 73.208 | β = 90 |
c = 94.818 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
MOLREP | phasing |
iMOSFLM | data reduction |
Aimless | data scaling |
Funding Organization | Location | Grant Number |
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Marsden Fund | New Zealand | -- |